RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 ASS1P00966 412 aaKnown RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 ATF6P18850 670 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 ATP5F1P24539 256 aaPredicted RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 SREBF1P36956 1147 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 SLC9A3P48764 834 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 HSD17B4P51659 736 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 MERTKQ12866 999 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 TRIP4Q15650 581 aaPredicted RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 CCDC142Q17RM4 750 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 ZNF181Q2M3W8 571 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 CACHD1Q5VU97 1274 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 TWF2Q6IBS0 349 aaKnown RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 TMIEQ8NEW7 156 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 ZFP28Q8NHY6 868 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 ZSCAN18Q8TBC5 510 aaPredicted RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 SH3RF3Q8TEJ3 882 aaPredicted RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 PPP1R10Q96QC0 940 aaKnown RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 CITED4Q96RK1 184 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 NODALQ96S42 347 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 ORAI2Q96SN7 254 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 RBM4BQ9BQ04 359 aaKnown RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 THUMPD3Q9BV44 507 aaKnown RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 RBM4Q9BWF3 364 aaKnown RBP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 TRIM8Q9BZR9 551 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 RNF38Q9H0F5 515 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.52□□□□□ -1.37
PCNX1-207ENST00000554691 GMIPQ9P107 970 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 SNCAIPQ9Y6H5 919 aa6.52□□□□□ -1.37
PCNX1-207ENST00000554691 hCG_1818297A0A087WSY0 165 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 PTGES3LE9PB15 166 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 KMOO15229 486 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 HS6ST1O60243 411 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 NRP2O60462 931 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 TSC22D2O75157 780 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 NDUFS2O75306 463 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 LGR5O75473 907 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 FYNP06241 537 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 GSTT2P0CG29 244 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 GSTT2BP0CG30 244 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 THRBP10828 461 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 LBPP18428 481 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 CASP7P55210 303 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SLC18A2Q05940 514 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 MTMR1Q13613 665 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 GTF2H3Q13889 308 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 MYLK3Q32MK0 819 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 RNASEH2BQ5TBB1 312 aaKnown RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 FAXCQ5TGI0 409 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 HIPK1Q86Z02 1210 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SMG8Q8ND04 991 aaKnown RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SPIRE2Q8WWL2 714 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 EMILIN2Q9BXX0 1053 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 IL1RL2Q9HB29 575 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SYTL2Q9HCH5 934 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 XPNPEP3Q9NQH7 507 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 FKBP14Q9NWM8 211 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 IFT80Q9P2H3 777 aaPredicted RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 H3BNH8 94 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 HAT1O14929 419 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 PMM2O15305 246 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 DYRK3O43781 588 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 TMCC2O75069 709 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 BCAS2O75934 225 aaPredicted RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SUPT7LO94864 414 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 CSPG5O95196 566 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 YWHABP31946 246 aaKnown RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ACLYP53396 1101 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SLC12A3P55017 1021 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ZNF45Q02386 682 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 RFTN1Q14699 578 aaPredicted RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SKIV2LQ15477 1246 aaKnown RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 RBBP7Q16576 425 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 PLEKHG6Q3KR16 790 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ZNF773Q6PK81 442 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SCARA5Q6ZMJ2 495 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ZCCHC23Q6ZST2 131 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 PLEKHM3Q6ZWE6 761 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ZNF767PQ75MW2 155 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 EIF3MQ7L2H7 374 aaKnown RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ATG16L2Q8NAA4 619 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 IPCEF1Q8WWN9 437 aaPredicted RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ATL1Q8WXF7 558 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 SPOCK2Q92563 424 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 VAT1Q99536 393 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 RTFDC1Q9BY42 306 aaPredicted RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 COQ10BQ9H8M1 238 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 MKS1Q9NXB0 559 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ZNHIT2Q9UHR6 403 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 TRHDEQ9UKU6 1024 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 TBX20Q9UMR3 447 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 USP18Q9UMW8 372 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 PDE10AQ9Y233 779 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 ERGIC3Q9Y282 383 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 TBC1D30Q9Y2I9 924 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
PCNX1-207ENST00000554691 PSMD11O00231 422 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 CCRL2O00421 344 aa6.51□□□□□ -1.37
PCNX1-207ENST00000554691 IFRD1O00458 451 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms