RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PARVAQ9NVD7 372 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 FBXL12Q9NXK8 326 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 MYO1AQ9UBC5 1043 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 SUSD2Q9UGT4 822 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 PILRBQ9UKJ0 227 aa10.94□□□□□ -0.66
SHMT2-213ENST00000554600 LUC7L2Q9Y383 392 aaKnown RBP10.94□□□□□ -0.66
SHMT2-213ENST00000554600 CFAP47Q6ZTR5 3102 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 IGLV3-10A0A075B6K4 115 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 A0A0D9SEW6 157 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 A0A1W2PQJ5 194 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 C4orf47A7E2U8 309 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 DDX3XO00571 662 aaKnown RBP eCLIP10.93□□□□□ -0.668e-15■■□□□ 14.3
SHMT2-213ENST00000554600 CBFA2T2O43439 604 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 RTN2O75298 545 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 SEMA4FO95754 770 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 GZMAP12544 262 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 SLC8A1P32418 973 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ACSL1P33121 698 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 HOXD12P35452 270 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 PBX1P40424 430 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ZBED6P86452 979 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ARID5BQ14865 1188 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 C9orf64Q5T6V5 341 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 LINGO4Q6UY18 593 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 Q6ZVU0 165 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 TMC6Q7Z403 805 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 DSG4Q86SJ6 1040 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ZNF683Q8IZ20 524 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 HDDC3Q8N4P3 179 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ZCCHC9Q8N567 271 aaKnown RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 CEP76Q8TAP6 659 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 CENPIQ92674 756 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 PTPRN2Q92932 1015 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 TBC1D31Q96DN5 1066 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 IQCDQ96DY2 449 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ALG14Q96F25 216 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 MAGEB5Q9BZ81 275 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 OSBPL2Q9H1P3 480 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 C6orf106Q9H6K1 298 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 ATP13A1Q9HD20 1204 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 FSCN3Q9NQT6 498 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 CNOT8Q9UFF9 292 aaKnown RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 EVLQ9UI08 416 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 EIF2B4Q9UI10 523 aaKnown RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 DNAI1Q9UI46 699 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 VPS51Q9UID3 782 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 SCML1Q9UN30 329 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 SLC6A14Q9UN76 642 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-213ENST00000554600 OR51B4Q9Y5P0 310 aa10.93□□□□□ -0.66
SHMT2-213ENST00000554600 A0A1W2PP55 124 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 TCRBV5S1A1TA0A578 114 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 ILVBLA1L0T0 632 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 METTL12A8MUP2 240 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 FAM72CH0Y354 149 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 CREB3O43889 395 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 RNF8O76064 485 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 LRIG2O94898 1065 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 FSBPO95073 299 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 ADH1BP00325 375 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 MT-CO1P00395 513 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 IGLV3-19P01714 112 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SERPING1P05155 500 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SERPINF2P08697 491 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SRCP12931 536 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 RHOQP17081 205 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 ENGP17813 658 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 GLDCP23378 1020 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 CASP14P31944 242 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 RECQLP46063 649 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-213ENST00000554600 DNA2P51530 1060 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 LIMK1P53667 647 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 GNA12Q03113 381 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 MAMLD1Q13495 774 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 ELAVL3Q14576 367 aaKnown RBP10.92□□□□□ -0.66
SHMT2-213ENST00000554600 POM121L1PQ3SYA9 428 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 FAM72AQ5TYM5 149 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 DAB2IPQ5VWQ8 1189 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 FAM72DQ6L9T8 149 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SLC23A3Q6PIS1 610 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 FAM72BQ86X60 149 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 PYROXD2Q8N2H3 581 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SH2D3CQ8N5H7 860 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 DCAF4L2Q8NA75 395 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 CADM4Q8NFZ8 388 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 NTAN1Q96AB6 310 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 TRIM11Q96F44 468 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 CCDC114Q96M63 670 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 FAM129BQ96TA1 746 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 PSMB7Q99436 277 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 EPAS1Q99814 870 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 PPARGC1AQ9UBK2 798 aaKnown RBP10.92□□□□□ -0.66
SHMT2-213ENST00000554600 ADAMTS1Q9UHI8 967 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 CAPN11Q9UMQ6 739 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.92□□□□□ -0.66
SHMT2-213ENST00000554600 BZW2Q9Y6E2 419 aaKnown RBP10.92□□□□□ -0.66
SHMT2-213ENST00000554600 SCINQ9Y6U3 715 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 LAMA1P25391 3075 aa10.92□□□□□ -0.66
SHMT2-213ENST00000554600 ACACBO00763 2458 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms