RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 FRMD8Q9BZ67 464 aaPredicted RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 B3GNT4Q9C0J1 378 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.61□□□□□ -1.83
VRK1-202ENST00000553683 RBM38Q9H0Z9 239 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 ISCUQ9H1K1 167 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 HIPK3Q9H422 1215 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 TAF1DQ9H5J8 278 aaPredicted RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 ZNF304Q9HCX3 659 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
VRK1-202ENST00000553683 GRHPRQ9UBQ7 328 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 WNT16Q9UBV4 365 aa3.61□□□□□ -1.83
VRK1-202ENST00000553683 EVPLQ92817 2033 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 HMX3A6NHT5 357 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 HOXC6P09630 235 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 PEPDP12955 493 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 UNGP13051 313 aaPredicted RBP3.6□□□□□ -1.83
VRK1-202ENST00000553683 ARSBP15848 533 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 TYK2P29597 1187 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 GJC1P36383 396 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 ARL4CP56559 192 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 ZP1P60852 638 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 ACTR2P61160 394 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 EGR4Q05215 589 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 PRKG1Q13976 671 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 ERV3-1Q14264 604 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 WASHC2DQ5SRD0 308 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 TMEM268Q5VZI3 342 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 JMJD6Q6NYC1 403 aaPredicted RBP3.6□□□□□ -1.83
VRK1-202ENST00000553683 ZNF549Q6P9A3 640 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 KIAA1324Q6UXG2 1013 aaKnown RBP3.6□□□□□ -1.83
VRK1-202ENST00000553683 SLC16A12Q6ZSM3 486 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 GPSM1Q86YR5 675 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 TMC8Q8IU68 726 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 USP38Q8NB14 1042 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 SPATA5Q8NB90 893 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 VPS37AQ8NEZ2 397 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 FAR1Q8WVX9 515 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 INPP5DQ92835 1189 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 WDR77Q9BQA1 342 aaPredicted RBP3.6□□□□□ -1.83
VRK1-202ENST00000553683 NTPCRQ9BSD7 190 aaKnown RBP3.6□□□□□ -1.83
VRK1-202ENST00000553683 ISCA1Q9BUE6 129 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 HDHD5Q9BXW7 423 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 MYLK2Q9H1R3 596 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 WDR26Q9H7D7 661 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 KRCC1Q9NPI7 259 aaPredicted RBP3.6□□□□□ -1.83
VRK1-202ENST00000553683 KLQ9UEF7 1012 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 KCND3Q9UK17 655 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 PCDHA7Q9UN72 937 aa3.6□□□□□ -1.83
VRK1-202ENST00000553683 IGKV2D-30A0A075B6S6 120 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 EME2A4GXA9 379 aaPredicted RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 TMCC1O94876 653 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 LDHAP00338 332 aaKnown RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 MMP3P08254 477 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 ACP5P13686 325 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 ENO3P13929 434 aaPredicted RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 TKTP29401 623 aaKnown RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 HOXD3P31249 432 aaPredicted RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 TNFSF8P32971 234 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CHKAP35790 457 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 RBM5P52756 815 aaKnown RBP eCLIP3.59□□□□□ -1.83
VRK1-202ENST00000553683 MVDP53602 400 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 NANOS2P60321 138 aaKnown RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 PPATQ06203 517 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 TRAF2Q12933 501 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 PKP1Q13835 747 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 TRIM14Q14142 442 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 DUSP6Q16828 381 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 ADCK5Q3MIX3 580 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 TUBB8Q3ZCM7 444 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CTXN3Q4LDR2 81 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 ARL13AQ5H913 290 aaPredicted RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 OTUD1Q5VV17 481 aaPredicted RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 NUGGCQ68CJ6 796 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 HMBOX1Q6NT76 420 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 DENND1BQ6P3S1 775 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CCDC174Q6PII3 467 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CCDC25Q86WR0 208 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 ADHFE1Q8IWW8 467 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 NKAPQ8N5F7 415 aaKnown RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 IQCF1Q8N6M8 205 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 C7orf57Q8NEG2 295 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 B4GALNT2Q8NHY0 566 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 NCSTNQ92542 709 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 RUBCNQ92622 972 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CAMK1GQ96NX5 476 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 PPP1R10Q96QC0 940 aaKnown RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 MEIS3Q99687 375 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 IFT27Q9BW83 186 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 ARHGAP39Q9C0H5 1083 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 KLHL31Q9H511 634 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CATSPERBQ9H7T0 1116 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 MRPL44Q9H9J2 332 aaKnown RBP3.59□□□□□ -1.83
VRK1-202ENST00000553683 PLAC1Q9HBJ0 212 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 THAP1Q9NVV9 213 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 IL36RNQ9UBH0 155 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 CD207Q9UJ71 328 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 RCE1Q9Y256 329 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 DERAQ9Y315 318 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms