RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NKX3-2P78367 333 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 UGP2Q16851 508 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 METTL21CQ5VZV1 264 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 BSPRYQ5W0U4 402 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 PDPK2PQ6A1A2 396 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 BHLHA9Q7RTU4 235 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 STRA8Q7Z7C7 330 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 CLEC14AQ86T13 490 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 RNF180Q86T96 592 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 PPP1R13LQ8WUF5 828 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 HAPLN3Q96S86 360 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 GORASP1Q9BQQ3 440 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 C20orf27Q9GZN8 174 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 TKTL2Q9H0I9 626 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 TMPRSS4Q9NRS4 437 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 NR2E3Q9Y5X4 410 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ARHGAP42A6NI28 874 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ZBTB24O43167 697 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 CIB2O75838 187 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ANXA9O76027 345 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 LRIG2O94898 1065 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 IGLV3-25P01717 112 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 SKIP12755 728 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 HOXC13P31276 330 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ABCE1P61221 599 aaKnown RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 SLC34A1Q06495 639 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 EIF4EBP2Q13542 120 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 CCDC6Q16204 474 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
SHMT2-205ENST00000553474 FSTL4Q6MZW2 842 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 SERINC5Q86VE9 423 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 KCNMB4Q86W47 210 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 DCLK2Q8N568 766 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 NPWQ8N729 165 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 MCMBPQ9BTE3 642 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 TMEM106CQ9BVX2 250 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 KIFC1Q9BW19 673 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 CEP41Q9BYV8 373 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 PCDHB12Q9Y5F1 795 aa13.17□□□□□ -0.3
SHMT2-205ENST00000553474 C2orf71A6NGG8 1288 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 M0QZQ0 153 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 PSMG1O95456 288 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ENO1P06733 434 aaKnown RBP13.16□□□□□ -0.3
SHMT2-205ENST00000553474 KITP10721 976 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 COL6A2P12110 1019 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 PRDX6P30041 224 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 CD68P34810 354 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-205ENST00000553474 MPP3Q13368 585 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 TUBB3Q13509 450 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 KCNA10Q16322 511 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ACSBG2Q5FVE4 666 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 RABGAP1LQ5R372 815 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-205ENST00000553474 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ZCCHC23Q6ZST2 131 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 GPRIN1Q7Z2K8 1008 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 LMNTD2Q8IXW0 634 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 PRR11Q96HE9 360 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-205ENST00000553474 FCRL3Q96P31 734 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-205ENST00000553474 CATSPERBQ9H7T0 1116 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ABCC13Q9NSE7 274 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 TMEM216Q9P0N5 145 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 ANGPTL2Q9UKU9 493 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
SHMT2-205ENST00000553474 I6L893 689 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 PRKCGP05129 697 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 ASGR1P07306 291 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 NFKB1P19838 968 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 CSRP3P50461 194 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 GRIK3Q13003 919 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 KPNB1Q14974 876 aaKnown RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 ANO4Q32M45 955 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 TIGD5Q53EQ6 642 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 FSCBQ5H9T9 825 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 FAM182AQ5T1J6 154 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 TIGD7Q6NT04 549 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 RFWD3Q6PCD5 774 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 AGMOQ6ZNB7 445 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 THEM5Q8N1Q8 247 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 PPFIBP2Q8ND30 876 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 TTC8Q8TAM2 541 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 ZSCAN18Q8TBC5 510 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-205ENST00000553474 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
SHMT2-205ENST00000553474 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms