RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 DNAI1Q9UI46 699 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 PCDHA13Q9Y5I0 950 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 EPN1Q9Y6I3 576 aaPredicted RBP12□□□□□ -0.49
TRAFD1-209ENST00000552896 GPR179Q6PRD1 2367 aa12□□□□□ -0.49
TRAFD1-209ENST00000552896 GVINP1Q7Z2Y8 2422 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 TARSL2A2RTX5 802 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 H3BRJ5 948 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 ATP9BO43861 1147 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 SNAP91O60641 907 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 RARAP10276 462 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 GOT1P17174 413 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 ARL4AP40617 200 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 P2RY2P41231 377 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 GEMIN4P57678 1058 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 BYSLQ13895 437 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 PARP15Q460N3 678 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 USP39Q53GS9 565 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 KCNT1Q5JUK3 1230 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 RETSATQ6NUM9 610 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 RAD9BQ6WBX8 426 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 POLNQ7Z5Q5 900 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 UMODL1-AS1Q8N2C9 162 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 SH2D3CQ8N5H7 860 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 FRS2Q8WU20 508 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 HSPH1Q92598 858 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 ARHGEF2Q92974 986 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 ACE2Q9BYF1 805 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 MKRN2Q9H000 416 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 PRDM16Q9HAZ2 1276 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 PRSS16Q9NQE7 514 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 SDK1Q7Z5N4 2213 aa11.99□□□□□ -0.49
TRAFD1-209ENST00000552896 PRR23AA6NEV1 266 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 GOLGA6L3A6NEY3 463 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 TTC34A8MYJ7 566 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 CBX4O00257 560 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 HRO43593 1189 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ZNF217O75362 1048 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ZMPSTE24O75844 475 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 LMNAP02545 664 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 KRT7P08729 469 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SRCP12931 536 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 GLDCP23378 1020 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 NUMBP49757 651 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SERPINH1P50454 418 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 NDST2P52849 883 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 YBEYP58557 167 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ZBTB16Q05516 673 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SRSF5Q13243 272 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SIM2Q14190 667 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ELAVL3Q14576 367 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 MESDQ14696 234 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 POLD3Q15054 466 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ZNF776Q68DI1 518 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 TXNRD3NBQ6F5E7 133 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 C22orf39Q6P5X5 142 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 KIAA1324Q6UXG2 1013 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 CEP68Q76N32 757 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 FAM71BQ8TC56 605 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 TSC1Q92574 1164 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 ERLEC1Q96DZ1 483 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 CALR3Q96L12 384 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 RSPH9Q9H1X1 276 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 NOL6Q9H6R4 1146 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 PCDH18Q9HCL0 1135 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 CWC15Q9P013 229 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 USP36Q9P275 1121 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 SLCO3A1Q9UIG8 710 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 RAB23Q9ULC3 237 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 HPCAL4Q9UM19 191 aa11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 REXO2Q9Y3B8 237 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 EP300Q09472 2414 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-209ENST00000552896 PLXNA2O75051 1894 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 LAMA1P25391 3075 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 BTNL10A8MVZ5 291 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ALOX15BO15296 676 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 DAPK3O43293 454 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SIN3BO75182 1162 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 IGLV3-19P01714 112 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 GJC1P36383 396 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ACVRL1P37023 503 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC1A1P43005 524 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 VAV2P52735 878 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CDH6P55285 790 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 TAS2R40P59535 323 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ARF5P84085 180 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SERINC3Q13530 473 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 KRT81Q14533 505 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 MAP7D1Q3KQU3 841 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 TTC31Q49AM3 519 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 C9orf64Q5T6V5 341 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 AFMIDQ63HM1 303 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms