RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TCAF2A6NFQ2 919 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 SOBPA7XYQ1 873 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 AVILO75366 819 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 SPAG6O75602 509 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 RFPL2O75678 378 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 PEX11BO96011 259 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 CKMP06732 381 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 GPX6P59796 221 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 TNK2Q07912 1038 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 SERINC3Q13530 473 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 HNRNPDQ14103 355 aaKnown RBP12.96□□□□□ -0.33
CACNB3-223ENST00000552480 ARHGAP15Q53QZ3 475 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 KCTD11Q693B1 232 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 HTR3DQ70Z44 454 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 PALM2Q8IXS6 379 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 CFAP52Q8N1V2 620 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 CNTD1Q8N815 330 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 SHKBP1Q8TBC3 707 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 EPS8L3Q8TE67 593 aaKnown RBP12.96□□□□□ -0.33
CACNB3-223ENST00000552480 NSMCE1Q8WV22 266 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 FCRL5Q96RD9 977 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 MLPHQ9BV36 600 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-223ENST00000552480 MAGEH1Q9H213 219 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 CENPHQ9H3R5 247 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 LRRC40Q9H9A6 602 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 PPCSQ9HAB8 311 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 GLOD4Q9HC38 313 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 ZDHHC7Q9NXF8 308 aa12.96□□□□□ -0.33
CACNB3-223ENST00000552480 DNMT3BQ9UBC3 853 aaKnown RBP12.96□□□□□ -0.33
CACNB3-223ENST00000552480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ILVBLA1L0T0 632 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 GFRA2O00451 464 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 NRG2O14511 850 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 TRDMT1O14717 391 aaKnown RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 TSPAN3O60637 253 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 PRAMEF11O60813 436 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 NEBLO76041 1014 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 HLA-DQB2P05538 268 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 RHOP08100 348 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 GSTA2P09210 222 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 GJA1P17302 382 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 PBX2P40425 430 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 CCR2P41597 374 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 MMP13P45452 471 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 RENBPP51606 427 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 SGSHP51688 502 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 RPS24P62847 133 aaKnown RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ZXDBP98169 803 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 GNA12Q03113 381 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 MTM1Q13496 603 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 RAB30Q15771 203 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 LONRF1Q17RB8 773 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 KCTD16Q68DU8 428 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 SETD3Q86TU7 594 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ZNF354CQ86Y25 554 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 IGDCC3Q8IVU1 814 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 AGGF1Q8N302 714 aaeCLIP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 TEX26Q8N6G2 289 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 FAM76AQ8TAV0 307 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ARHGEF2Q92974 986 aaKnown RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 TLCD1Q96CP7 247 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 SIGLEC10Q96LC7 697 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ZNF599Q96NL3 588 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 SLC46A2Q9BY10 475 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 PBX4Q9BYU1 374 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 PRKD2Q9BZL6 878 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 STMN4Q9H169 189 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 NKX2-4Q9H2Z4 354 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 RBM22Q9NW64 420 aaKnown RBP eCLIP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 CFAP97Q9P2B7 532 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 MSRAQ9UJ68 235 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 AAR2Q9Y312 384 aaKnown RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
CACNB3-223ENST00000552480 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
CACNB3-223ENST00000552480 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 EXOC1LA0A1B0GW35 172 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
CACNB3-223ENST00000552480 SMIM23A6NLE4 172 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 J3KR12 359 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 AP3B1O00203 1094 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 LEFTY2O00292 366 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 MOSPD3O75425 235 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 ANXA9O76027 345 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 CPP00450 1065 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 AGTP01019 485 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 RHOCP08134 193 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 ACVRL1P37023 503 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 GRIA1P42261 906 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 GEMP55040 296 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 TEAD2Q15562 447 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 KLHL38Q2WGJ6 581 aa12.94□□□□□ -0.34
CACNB3-223ENST00000552480 STXBP5Q5T5C0 1151 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms