RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MTMR11A4FU01 709 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 HOXA2O43364 376 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ANXA9O76027 345 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 BPGMP07738 259 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 CPB1P15086 417 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 PAPOLAP51003 745 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 PDE1BQ01064 536 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 EFEMP1Q12805 493 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 PDE1CQ14123 709 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SMAD1Q15797 465 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TEDDM1Q5T9Z0 273 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ATG16L1Q676U5 607 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 RAB3IL1Q8TBN0 382 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 E2F7Q96AV8 911 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ERP27Q96DN0 273 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 MFSD3Q96ES6 412 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 ZNF419Q96HQ0 510 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 TMEM175Q9BSA9 504 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 CHRAC1Q9NRG0 131 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 OLA1Q9NTK5 396 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 DCDC2Q9UHG0 476 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 DCTN4Q9UJW0 460 aa14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 MRPL42Q9Y6G3 142 aaKnown RBP14.29□□□□□ -0.12
RAB3IP-216ENST00000552199 DOCK4Q8N1I0 1966 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 H7C4K7 107 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 GLRA3O75311 464 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 VNN2O95498 520 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 TOP3BO95985 862 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 GALTP07902 379 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 SPRP35270 261 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 PSEN1P49768 467 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 SMARCB1Q12824 385 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 ELAVL2Q12926 359 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 TAF10Q12962 218 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 TRIP4Q15650 581 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 MS4A13Q5J8X5 152 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 CYB5D1Q6P9G0 228 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 RNF19BQ6ZMZ0 732 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 STRA8Q7Z7C7 330 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 TBC1D1Q86TI0 1168 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 UMODL1-AS1Q8N2C9 162 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 ATP6V0D2Q8N8Y2 350 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 SH3TC2Q8TF17 1288 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 PPP1R2P1Q96PQ5 205 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 RBBP8Q99708 897 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 TBL1YQ9BQ87 522 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 KIFC1Q9BW19 673 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 NOL6Q9H6R4 1146 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 PRDM5Q9NQX1 630 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 TLR8Q9NR97 1041 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 RBM22Q9NW64 420 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 COMMD8Q9NX08 183 aa14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 PPARGC1AQ9UBK2 798 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-216ENST00000552199 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 NT5C1B-RDH14C9J2C7 533 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 ATP5HO75947 161 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 UNC5CO95185 931 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 TBX18O95935 607 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 MT-CYBP00156 380 aaPredicted RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 HAPLN1P10915 354 aaPredicted RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 NQO1P15559 274 aaKnown RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 RHOQP17081 205 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 NDST2P52849 883 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 GEMP55040 296 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 ELF3P78545 371 aaPredicted RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 TMPRSS15P98073 1019 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 BST1Q10588 318 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 CHI3L2Q15782 390 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 DBN1Q16643 649 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 INSCQ1MX18 579 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 MGAT5BQ3V5L5 792 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 HSP90AA5PQ58FG0 334 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 RTP2Q5QGT7 225 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 RASIP1Q5U651 963 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 ASRGL1Q7L266 308 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 ATP2A3Q93084 1043 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 ISL2Q96A47 359 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 KLHL29Q96CT2 875 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 C7orf26Q96N11 449 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 AGAP2Q99490 1192 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 MRPL9Q9BYD2 267 aaKnown RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 ZYG11BQ9C0D3 744 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 UNC93B1Q9H1C4 597 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 CRISPLD1Q9H336 500 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 KCNK13Q9HB14 408 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 IPO11Q9UI26 975 aaKnown RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 EMCNQ9ULC0 261 aa14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 FNDC1Q4ZHG4 1894 aaPredicted RBP14.27□□□□□ -0.12
RAB3IP-216ENST00000552199 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 GSRP00390 522 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 HLA-DQB2P05538 268 aa14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 DLDP09622 509 aaKnown RBP14.27□□□□□ -0.13
RAB3IP-216ENST00000552199 NMBRP28336 390 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms