RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TRIM14Q14142 442 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 SF3A2Q15428 464 aaKnown RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 RSPO4Q2I0M5 234 aaPredicted RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 MAP7D1Q3KQU3 841 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 CCDC14Q49A88 953 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 SPDYCQ5MJ68 293 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 WDR45BQ5MNZ6 344 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 PMS2CLQ68D20 193 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 ZNF776Q68DI1 518 aaPredicted RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 PRR23CQ6ZRP0 262 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 MON1BQ7L1V2 547 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 VASH1Q7L8A9 365 aaPredicted RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 ZNF571Q7Z3V5 609 aaPredicted RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 RABEPKQ7Z6M1 372 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 TFAP2DQ7Z6R9 452 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 SLFN11Q7Z7L1 901 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 DSG4Q86SJ6 1040 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 C14orf80Q86SX3 495 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 DRC7Q8IY82 874 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 APCDD1Q8J025 514 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 CYP4X1Q8N118 509 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 ATP11CQ8NB49 1132 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 KDM1BQ8NB78 822 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 SNX19Q92543 992 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 NT5C3BQ969T7 300 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 TBC1D31Q96DN5 1066 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 MYEOVQ96EZ4 313 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 P2RY11Q96G91 374 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 TOE1Q96GM8 510 aaKnown RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 C1orf74Q96LT6 269 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 PRMT1Q99873 361 aaKnown RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 OMDQ99983 421 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 NCAPGQ9BPX3 1015 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 FEM1AQ9BSK4 669 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 CNPY3Q9BT09 278 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 C2orf49Q9BVC5 232 aaPredicted RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 GPR174Q9BXC1 333 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 MIR1-1HGQ9H1L0 117 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 ITM2CQ9NQX7 267 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 TMPRSS4Q9NRS4 437 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 MPP6Q9NZW5 540 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 OR12D3Q9UGF7 316 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 HPCAL4Q9UM19 191 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 CAPN11Q9UMQ6 739 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 SNX10Q9Y5X0 201 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.06□□□□□ -1.44
CCDC65-204ENST00000552188 PLXNA2O75051 1894 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 TMEM131Q92545 1883 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 CHD5Q8TDI0 1954 aa6.06□□□□□ -1.44
CCDC65-204ENST00000552188 ITIH6Q6UXX5 1313 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ATXN2Q99700 1313 aaKnown RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 FAM47DPA6NHR8 397 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 DRGXA6NNA5 263 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 TTC34A8MYJ7 566 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 C1QTNF3-AMACRE9PGA6 284 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CBX4O00257 560 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CCP110O43303 1012 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CREB3O43889 395 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 PRPSAP2O60256 369 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 RNASEH2AO75792 299 aaKnown RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CNTN5O94779 1100 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CFIP05156 583 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 PLEKP08567 350 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 RHOQP17081 205 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CASP14P31944 242 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 SLC8A1P32418 973 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ETFBP38117 255 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CTSOP43234 321 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 SSR1P43307 286 aaKnown RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 PSMD8P48556 350 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 STK19P49842 368 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 DNA2P51530 1060 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 TPMTP51580 245 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ZNF143P52747 638 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 PLK1P53350 603 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 COPAP53621 1224 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 AIF1P55008 147 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 GSCP56915 257 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 RPS14P62263 151 aaKnown RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 RPL7AP62424 266 aaKnown RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ZBTB16Q05516 673 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ZNF33AQ06730 810 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 PTP4A2Q12974 167 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ENPP2Q13822 863 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 PUM1Q14671 1186 aaKnown RBP eCLIP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 HNRNPA1L2Q32P51 320 aaKnown RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 ALFQ53S48 1182 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 TRIM61Q5EBN2 209 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 CCDC122Q5T0U0 273 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 SH3PXD2AQ5TCZ1 1133 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 OTUD1Q5VV17 481 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 FAM46CQ5VWP2 391 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 RNF43Q68DV7 783 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 SPECC1LQ69YQ0 1117 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 TRNP1Q6NT89 227 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 RETSATQ6NUM9 610 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 TMC6Q7Z403 805 aa6.05□□□□□ -1.44
CCDC65-204ENST00000552188 SETD3Q86TU7 594 aaPredicted RBP6.05□□□□□ -1.44
CCDC65-204ENST00000552188 SYT12Q8IV01 421 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms