RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 PREBQ9HCU5 417 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 FOXJ2Q9P0K8 574 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 TFIP11Q9UBB9 837 aaKnown RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 ACSL6Q9UKU0 697 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 ZFR2Q9UPR6 939 aaKnown RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 CRYBG3Q68DQ2 2970 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 CELSR2Q9HCU4 2923 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 PRAMEF33A0A0G2JMD5 474 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 POM121BA6NF01 834 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 AQP9O43315 295 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 BNIP3LO60238 219 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 PRAMEF10O60809 474 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 NME1P15531 152 aaKnown RBP14.86□□□□□ -0.03
VPS29-209ENST00000551655 KCNAB2Q13303 367 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 C1orf61Q13536 156 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 MORC3Q14149 939 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 DCAF6Q58WW2 860 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 FAM173BQ6P4H8 233 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 Q6ZVU0 165 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 DSG4Q86SJ6 1040 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 ZNF557Q8N988 423 aaPredicted RBP14.86□□□□□ -0.03
VPS29-209ENST00000551655 SLC4A11Q8NBS3 891 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 TPCN2Q8NHX9 752 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 OR8D1Q8WZ84 308 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 UBXN6Q9BZV1 441 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 SLC39A2Q9NP94 309 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 ZNF71Q9NQZ8 489 aaPredicted RBP14.86□□□□□ -0.03
VPS29-209ENST00000551655 XPO7Q9UIA9 1087 aaKnown RBP14.86□□□□□ -0.03
VPS29-209ENST00000551655 RABGEF1Q9UJ41 708 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 PPM1HQ9ULR3 514 aa14.86□□□□□ -0.03
VPS29-209ENST00000551655 A6NNZ2 444 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 PIK3R2O00459 728 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 NTN3O00634 580 aaPredicted RBP14.85□□□□□ -0.03
VPS29-209ENST00000551655 RAD51BO15315 384 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 MOCS3O95396 460 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 MOCS2O96007 188 aaPredicted RBP14.85□□□□□ -0.03
VPS29-209ENST00000551655 CSF2P04141 144 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 ETV5P41161 510 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 POLE2P56282 527 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 TBX4P57082 545 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 SNRPFP62306 86 aaKnown RBP14.85□□□□□ -0.03
VPS29-209ENST00000551655 GOLGA7BQ2TAP0 167 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 MS4A13Q5J8X5 152 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 HORMAD1Q86X24 394 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 CIR1Q86X95 450 aaPredicted RBP14.85□□□□□ -0.03
VPS29-209ENST00000551655 ZSCAN1Q8NBB4 408 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 TAS1R2Q8TE23 839 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 IFT43Q96FT9 208 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 IPO9Q96P70 1041 aaKnown RBP14.85□□□□□ -0.03
VPS29-209ENST00000551655 NIF3L1Q9GZT8 377 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 LRRC4Q9HBW1 653 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 GPR27Q9NS67 375 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 SALL4Q9UJQ4 1053 aa14.85□□□□□ -0.03
VPS29-209ENST00000551655 TYW5A2RUC4 315 aaKnown RBP14.84□□□□□ -0.03
VPS29-209ENST00000551655 C1QTNF3-AMACRE9PGA6 284 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 SPINT1O43278 529 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 GCATO75600 419 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 CTSLP07711 333 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 PDGFRAP16234 1089 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 JUNDP17535 347 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 RAD23BP54727 409 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 FGL2Q14314 439 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 ACCSLQ4AC99 568 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 FAM46CQ5VWP2 391 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 NUGGCQ68CJ6 796 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 MSANTD2Q6P1R3 559 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 PARGQ86W56 976 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 ANKRD52Q8NB46 1076 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 FCRL2Q96LA5 508 aaPredicted RBP14.84□□□□□ -0.03
VPS29-209ENST00000551655 IL12RB2Q99665 862 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 BOCQ9BWV1 1114 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 ADNPQ9H2P0 1102 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 TNMDQ9H2S6 317 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 MMRN2Q9H8L6 949 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 ABCC13Q9NSE7 274 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 KBTBD4Q9NVX7 518 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 SEPT10Q9P0V9 454 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 LOXL2Q9Y4K0 774 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 CSNK1G3Q9Y6M4 447 aa14.84□□□□□ -0.03
VPS29-209ENST00000551655 SPTY2D1-AS1A0A0U1RR47 76 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 H3BM21 787 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 PCDH8O95206 1070 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 JMJD7P0C870 316 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 TRIM49P0CI25 452 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 TRIM49CP0CI26 452 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 RNF224P0DH78 156 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 LCP1P13796 627 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 ZNF18P17022 549 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 POU3F2P20265 443 aaPredicted RBP14.83□□□□□ -0.04
VPS29-209ENST00000551655 NNMTP40261 264 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 KNOP1Q1ED39 458 aaKnown RBP14.83□□□□□ -0.04
VPS29-209ENST00000551655 ARHGAP17Q68EM7 881 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 BORAQ6PGQ7 559 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 CCDC117Q8IWD4 279 aaPredicted RBP14.83□□□□□ -0.04
VPS29-209ENST00000551655 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 LGI2Q8N0V4 545 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 UBA3Q8TBC4 463 aa14.83□□□□□ -0.04
VPS29-209ENST00000551655 CLEC4CQ8WTT0 213 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms