RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CDC16Q13042 620 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 PGS1Q32NB8 556 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 UNC5AQ6ZN44 842 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 PHF13Q86YI8 300 aaPredicted RBP16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 C10orf107Q8IVU9 208 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 TADA1Q96BN2 335 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 OSBPL6Q9BZF3 934 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 C3orf18Q9UK00 162 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 KLHL20Q9Y2M5 609 aa16.06■□□□□ 0.16
RBFOX1-212ENST00000550418 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CENPXA8MT69 81 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 ASMTLO95671 621 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 LBPP18428 481 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CCNFP41002 786 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 SAMD7Q7Z3H4 446 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CHSY1Q86X52 802 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 RBM22Q9NW64 420 aaKnown RBP eCLIP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PIPSLA2A3N6 862 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 TBX10O75333 385 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 MICAL2O94851 1124 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PTGIRP43119 386 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CCR3P51677 355 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 BST2Q10589 180 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 KLHL17Q6TDP4 642 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PIWIL4Q7Z3Z4 852 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 TNS4Q8IZW8 715 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 SIX5Q8N196 739 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 EHD3Q9NZN3 535 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 FAM95CA0A1B0GW59 222 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 TMEM150BA6NC51 233 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CELF2O95319 508 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 GMPSP49915 693 aaPredicted RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 TMEM62Q0P6H9 643 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 SYTL3Q4VX76 610 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 C6orf52Q5T4I8 152 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 ZHX1-C8orf76Q96EF9 292 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 SPATA13Q96N96 652 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PCDHB18PQ96TA0 734 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 KCNQ5Q9NR82 932 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 H0YC42 278 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 SNPHO15079 494 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 CD3EAPO15446 510 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 FOXN2P32314 431 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 NNMTP40261 264 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 NDST1P52848 882 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 NOMO3P69849 1222 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 BRSK2Q8IWQ3 736 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 ACTRT2Q8TDY3 377 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 PPP1R14BQ96C90 147 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 C12orf65Q9H3J6 166 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 FANCEQ9HB96 536 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 COG5Q9UP83 839 aa16.05■□□□□ 0.16
RBFOX1-212ENST00000550418 GAKO14976 1311 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CLUHO75153 1309 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CXCL8P10145 99 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 TAL1P17542 331 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CDH8P55286 799 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 BNIP2Q12982 314 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CDH19Q9H159 772 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 C19orf81C9J6K1 198 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ANXA6P08133 673 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ATP5F1P24539 256 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CSE1LP55060 971 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 TDRPQ86YL5 185 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ZDHHC17Q8IUH5 632 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 RNF157Q96PX1 679 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ACOX2Q99424 681 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 SSU72Q9NP77 194 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CRLS1Q9UJA2 301 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 NADKO95544 446 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 TAB1Q15750 504 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 MTX3Q5HYI7 312 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 TYW3Q6IPR3 259 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 ADGRD1Q6QNK2 874 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 SCUBE3Q8IX30 993 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 FBXO30Q8TB52 745 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 EPB41L1Q9H4G0 881 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
RBFOX1-212ENST00000550418 AVILO75366 819 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 CYP1A1P04798 512 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 IL12AP29459 219 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SHMT1P34896 483 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms