RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 C21orf59P57076 290 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 YWHAZP63104 245 aaKnown RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 MTA1Q13330 715 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SLC12A1Q13621 1099 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SMAD1Q15797 465 aaKnown RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 DCAF6Q58WW2 860 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 FSCBQ5H9T9 825 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 KCNT1Q5JUK3 1230 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SYPL2Q5VXT5 272 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 RNF219Q5W0B1 726 aaPredicted RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 SMYD5Q6GMV2 418 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 NCEH1Q6PIU2 408 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 LAYNQ6UX15 382 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 TMEM110Q86TL2 294 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 CHSY1Q86X52 802 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 MMAAQ8IVH4 418 aaKnown RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 CFAP52Q8N1V2 620 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 OR2T34Q8NGX1 318 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 GANCQ8TET4 914 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 NELFBQ8WX92 580 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 MYEOVQ96EZ4 313 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 FAM81BQ96LP2 452 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SLC6A18Q96N87 628 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 MED15Q96RN5 788 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 OMDQ99983 421 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 INTS2Q9H0H0 1204 aaKnown RBP7.87□□□□□ -1.15
NEK3-201ENST00000550331 POPDC2Q9HBU9 364 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEK3-201ENST00000550331 TJP2Q9UDY2 1190 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 FTSJ1Q9UET6 329 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 SERGEFQ9UGK8 458 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 PCDHGA1Q9Y5H4 931 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEK3-201ENST00000550331 MYO18BQ8IUG5 2567 aa7.87□□□□□ -1.15
NEK3-201ENST00000550331 TP53BP1Q12888 1972 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 FAM47DPA6NHR8 397 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 KCNU1A8MYU2 1149 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 E5RJQ4 531 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 F5H5T6 163 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 KCNK3O14649 394 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 GPR37O15354 613 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 YKT6O15498 198 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 SLC7A4O43246 635 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 TRUB2O95900 331 aaKnown RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 GLI1P08151 1106 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 SLC2A3P11169 496 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 CDK4P11802 303 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 KRT5P13647 590 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 GOT1P17174 413 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 TACR2P21452 398 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 BMP6P22004 513 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ITGB7P26010 798 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 MZF1P28698 734 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 CD38P28907 300 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 GNA15P30679 374 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 CCR1P32246 355 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 NNMTP40261 264 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 CTSOP43234 321 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 PLK1P53350 603 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ADPRHP54922 357 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 OXCT1P55809 520 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ECT2LQ008S8 904 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 SULT2A1Q06520 285 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 PAK1Q13153 545 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 PDCLQ13371 301 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 EIF4EBP2Q13542 120 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 MORC3Q14149 939 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 KCNJ12Q14500 433 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ELAVL3Q14576 367 aaKnown RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 ZC3H12AQ5D1E8 599 aaKnown RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 RAP1GAP2Q684P5 730 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ISM2Q6H9L7 571 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 KLHL10Q6JEL2 608 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 DENND1BQ6P3S1 775 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 MMS22LQ6ZRQ5 1243 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 SND1Q7KZF4 910 aaKnown RBP eCLIP7.86□□□□□ -1.15
NEK3-201ENST00000550331 LGI2Q8N0V4 545 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 AADATQ8N5Z0 425 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ZNF606Q8WXB4 792 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 PTPRN2Q92932 1015 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 FAM131CQ96AQ9 280 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 SPAG5Q96R06 1193 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 FAM129BQ96TA1 746 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 ELF4Q99607 663 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 NEUROG2Q9H2A3 272 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 KDM4CQ9H3R0 1056 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 THAP9Q9H5L6 903 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 UBE2TQ9NPD8 197 aaPredicted RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 GDF3Q9NR23 364 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 SLC12A6Q9UHW9 1150 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 XPO7Q9UIA9 1087 aaKnown RBP7.86□□□□□ -1.15
NEK3-201ENST00000550331 CTNND2Q9UQB3 1225 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 CEP83Q9Y592 693 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 RAI2Q9Y5P3 530 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 CKAP5Q14008 2032 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 MYLKQ15746 1914 aa7.86□□□□□ -1.15
NEK3-201ENST00000550331 COL6A6A6NMZ7 2263 aa7.85□□□□□ -1.15
NEK3-201ENST00000550331 A0A1B0GVM2 712 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms