RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ASLP04424 464 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 CTSLP07711 333 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 SRPRAP08240 638 aaKnown RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 H2AFZP0C0S5 128 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 TMEM253P0C7T8 217 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 C7P10643 843 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 IL4RP24394 825 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 EPHB2P29323 1055 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 TPMTP51580 245 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 ARSEP51690 589 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 SLC12A1Q13621 1099 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 DPYSQ14117 519 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 DLG2Q15700 870 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 POM121L1PQ3SYA9 428 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 ERMARDQ5T6L9 678 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 PMS2CLQ68D20 193 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 TCEAL6Q6IPX3 200 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 ARHGAP36Q6ZRI8 547 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 H2AFVQ71UI9 128 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 SETD3Q86TU7 594 aaPredicted RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 FAM124AQ86V42 546 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 ARHGAP12Q8IWW6 846 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 SH2D3CQ8N5H7 860 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 AADATQ8N5Z0 425 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 RTL3Q8N8U3 475 aaKnown RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 DCAF4L2Q8NA75 395 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 SLC35G2Q8TBE7 412 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 HSPH1Q92598 858 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 HMCESQ96FZ2 354 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 CELF6Q96J87 481 aaKnown RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 ZC3H10Q96K80 434 aaKnown RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 CCDC42Q96M95 316 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 MRPL47Q9HD33 250 aaKnown RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 TMEM74BQ9NUR3 256 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
RAB5B-208ENST00000550283 CTTNBP2NLQ9P2B4 639 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 CHD5Q8TDI0 1954 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 NUMA1Q14980 2115 aa11.48□□□□□ -0.57
RAB5B-208ENST00000550283 PLXND1Q9Y4D7 1925 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ATXN2Q99700 1313 aaKnown RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 WASH4PA8MWX3 477 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PATE3B3GLJ2 98 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 CBX4O00257 560 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 NPC1O15118 1278 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 MID1O15344 667 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PRPSAP2O60256 369 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 SYNCRIPO60506 623 aaKnown RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ALDH1A2O94788 518 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PROSCO94903 275 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 LCA5LO95447 670 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 TPM1P09493 284 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ERCC2P18074 760 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 AMPD1P23109 780 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 GKP32189 559 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ACSL1P33121 698 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PCK1P35558 622 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 GJC1P36383 396 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 SPEM2Q0P670 501 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 MTA1Q13330 715 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 USP39Q53GS9 565 aaKnown RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PPP6R3Q5H9R7 873 aaPredicted RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 MMAAQ8IVH4 418 aaKnown RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ACRBPQ8NEB7 543 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 LRRN4Q8WUT4 740 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 TSC1Q92574 1164 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 SIPA1Q96FS4 1042 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 NSMCE3Q96MG7 304 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PANX2Q96RD6 677 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 RSPH9Q9H1X1 276 aaPredicted RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ARRDC1-AS1Q9H2J1 176 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 LRRC19Q9H756 370 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 PCDH18Q9HCL0 1135 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ATP13A1Q9HD20 1204 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 FSCN3Q9NQT6 498 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 ITM2CQ9NQX7 267 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 HS3ST2Q9Y278 367 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
RAB5B-208ENST00000550283 DUSP10Q9Y6W6 482 aa11.47□□□□□ -0.57
RAB5B-208ENST00000550283 TNRC6BQ9UPQ9 1833 aaKnown RBP11.46□□□□□ -0.57
RAB5B-208ENST00000550283 EDDM13A0A1B0GTR0 161 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 RASA4BC9J798 803 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 J3KR12 359 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 EEF2KO00418 725 aaKnown RBP11.46□□□□□ -0.57
RAB5B-208ENST00000550283 RASA4O43374 803 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 BNIP3LO60238 219 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 GJB3O75712 270 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 RNF8O76064 485 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 MOCS3O95396 460 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 MAOBP27338 520 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 CDC25BP30305 580 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 CNR2P34972 360 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 DRD3P35462 400 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 PSMD8P48556 350 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 MAPKAPK2P49137 400 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 TPI1P60174 286 aa11.46□□□□□ -0.57
RAB5B-208ENST00000550283 PIGHQ14442 188 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-208ENST00000550283 MESDQ14696 234 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms