RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 USP39Q53GS9 565 aaKnown RBP19.81■□□□□ 0.76
DDX54-207ENST00000550016 KIAA1328Q86T90 577 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 SH2D3CQ8N5H7 860 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 CCDC112Q8NEF3 446 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 OR2T3Q8NH03 318 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 CALR3Q96L12 384 aaKnown RBP19.81■□□□□ 0.76
DDX54-207ENST00000550016 MRGPRX1Q96LB2 322 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 TPSD1Q9BZJ3 242 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 PRSS16Q9NQE7 514 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 HPCAL4Q9UM19 191 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 HS3ST2Q9Y278 367 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 SHROOM3Q8TF72 1996 aa19.81■□□□□ 0.76
DDX54-207ENST00000550016 BTNL10A8MVZ5 291 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 PROB1E7EW31 1015 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 PJA2O43164 708 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 MT-CO1P00395 513 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 GLDCP23378 1020 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 GJC1P36383 396 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 NDST2P52849 883 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 COPAP53621 1224 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 CDH6P55285 790 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 DPYSQ14117 519 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 PARP15Q460N3 678 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 ACCSLQ4AC99 568 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 RETSATQ6NUM9 610 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 TMPRSS6Q8IU80 811 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 TXLNBQ8N3L3 684 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 KCTD6Q8NC69 237 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 FAM71BQ8TC56 605 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 FRS2Q8WU20 508 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 GAB3Q8WWW8 586 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 TSC1Q92574 1164 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 MKRN2Q9H000 416 aaKnown RBP19.8■□□□□ 0.76
DDX54-207ENST00000550016 MTG2Q9H4K7 406 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 PRDM16Q9HAZ2 1276 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 RCOR3Q9P2K3 495 aaPredicted RBP19.8■□□□□ 0.76
DDX54-207ENST00000550016 RALGAPA1Q6GYQ0 2036 aa19.8■□□□□ 0.76
DDX54-207ENST00000550016 CXorf51AA0A1B0GTR3 108 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 RASA4BC9J798 803 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 RASA4O43374 803 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 KDELR3O43731 214 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 BUB1BO60566 1050 aaPredicted RBP19.79■□□□□ 0.76
DDX54-207ENST00000550016 SIN3BO75182 1162 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 RPP40O75818 363 aaKnown RBP19.79■□□□□ 0.76
DDX54-207ENST00000550016 SRCP12931 536 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 ARSEP51690 589 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 SRSF5Q13243 272 aaKnown RBP19.79■□□□□ 0.76
DDX54-207ENST00000550016 BYSLQ13895 437 aaKnown RBP19.79■□□□□ 0.76
DDX54-207ENST00000550016 PDK2Q15119 407 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 DLG2Q15700 870 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 C9orf64Q5T6V5 341 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 KIAA1324Q6UXG2 1013 aaKnown RBP19.79■□□□□ 0.76
DDX54-207ENST00000550016 LINGO4Q6UY18 593 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 MAP7D3Q8IWC1 876 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 LRRC8AQ8IWT6 810 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 ATP11CQ8NB49 1132 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 PTPRN2Q92932 1015 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 CSPG4P5Q96PW8 444 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 LACRTQ9GZZ8 138 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 SLC6A17Q9H1V8 727 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 SALL4Q9UJQ4 1053 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 ALG6Q9Y672 507 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 DUSP10Q9Y6W6 482 aa19.79■□□□□ 0.76
DDX54-207ENST00000550016 C7P10643 843 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 COMTP21964 271 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 AMPD1P23109 780 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 CLCN6P51797 869 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 GEMIN4P57678 1058 aaKnown RBP19.78■□□□□ 0.76
DDX54-207ENST00000550016 ARF5P84085 180 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 SERINC3Q13530 473 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 SIM2Q14190 667 aaPredicted RBP19.78■□□□□ 0.76
DDX54-207ENST00000550016 LRRC38Q5VT99 294 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 CEP68Q76N32 757 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 METTL3Q86U44 580 aaKnown RBP19.78■□□□□ 0.76
DDX54-207ENST00000550016 ZNF354CQ86Y25 554 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 LZTR1Q8N653 840 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 TPCN2Q8NHX9 752 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 PRCCQ92733 491 aaPredicted RBP19.78■□□□□ 0.76
DDX54-207ENST00000550016 SIPA1Q96FS4 1042 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 HMCESQ96FZ2 354 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 PHOX2BQ99453 314 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 DESI2Q9BSY9 194 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 KLC2Q9H0B6 622 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 EPC1Q9H2F5 836 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 LRRC19Q9H756 370 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 INVSQ9Y283 1065 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 SDK1Q7Z5N4 2213 aa19.78■□□□□ 0.76
DDX54-207ENST00000550016 ZSCAN5CA6NGD5 496 aaPredicted RBP19.77■□□□□ 0.76
DDX54-207ENST00000550016 K7ERQ8 282 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 DCLK1O15075 740 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 ARHGAP6O43182 974 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 SMAD6O43541 496 aaKnown RBP19.77■□□□□ 0.76
DDX54-207ENST00000550016 SPOPO43791 374 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 RNASEH1O60930 286 aaKnown RBP19.77■□□□□ 0.76
DDX54-207ENST00000550016 ZNF217O75362 1048 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 CD48P09326 243 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 VAV1P15498 845 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 IL4RP24394 825 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 P2RY2P41231 377 aa19.77■□□□□ 0.76
DDX54-207ENST00000550016 SERPINH1P50454 418 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms