RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ARTNQ5T4W7 220 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 FAM102AQ5T9C2 384 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 TAF3Q5VWG9 929 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 NAPEPLDQ6IQ20 393 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 TRNP1Q6NT89 227 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 TMPRSS7Q7RTY8 843 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 SERAC1Q96JX3 654 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 PPP1R9BQ96SB3 815 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 TBCBQ99426 244 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 TMPRSS4Q9NRS4 437 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 SAMSN1Q9NSI8 373 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 PPM1HQ9ULR3 514 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 SNX10Q9Y5X0 201 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 CHD5Q8TDI0 1954 aa17.86■□□□□ 0.45
CHMP1A-205ENST00000548650 GOLGA8CPA6NN73 597 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 MCF2LO15068 1137 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 SNAP91O60641 907 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 LSM8O95777 96 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 RHOCP08134 193 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 SRCP12931 536 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 UCHL3P15374 230 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 NXPH1P58417 271 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 DEUP1Q05D60 604 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 CNTN1Q12860 1018 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 SLC25A52Q3SY17 297 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 POM121L1PQ3SYA9 428 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 ACCSLQ4AC99 568 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 C2CD6Q53TS8 623 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 PRAMEF14Q5SWL7 426 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 BNIPLQ7Z465 357 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 NOP9Q86U38 636 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 GATAD2AQ86YP4 633 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 ARID1BQ8NFD5 2236 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 PIP4K2CQ8TBX8 421 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 EPS8L1Q8TE68 723 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 SKA1Q96BD8 255 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 C18orf8Q96DM3 657 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 MUC3BQ9H195 1237 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 PDCL3Q9H2J4 239 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 KDM4CQ9H3R0 1056 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 WDCPQ9H6R7 721 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 ARHGAP20Q9P2F6 1191 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 FTSJ1Q9UET6 329 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 VPS51Q9UID3 782 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 ITPR1Q14643 2758 aa17.85■□□□□ 0.45
CHMP1A-205ENST00000548650 IGLV3-10A0A075B6K4 115 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3DA0A087WVF3 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3IA0A087WXS9 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3EA0A087X179 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3KA0A087X1G2 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3FA6NER0 549 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3LB9A6J9 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 C1QTNF3-AMACRE9PGA6 284 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 MT-CO1P00395 513 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 CTSLP07711 333 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3HP0C7X1 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 EEF1GP26641 437 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 EPHA8P29322 1005 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 NOMO3P69849 1222 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TCP11X2Q5H9J9 407 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 FAM46CQ5VWP2 391 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3GQ6DHY5 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3CQ6IPX1 549 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TRIM69Q86WT6 500 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 TBC1D3Q8IZP1 549 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 DCAF4L2Q8NA75 395 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 SAP25Q8TEE9 199 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 C2orf49Q9BVC5 232 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 GANQ9H2C0 597 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 GDF3Q9NR23 364 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 ZNF212Q9UDV6 495 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 PAXBP1Q9Y5B6 917 aa17.84■□□□□ 0.45
CHMP1A-205ENST00000548650 ADAMTS20P59510 1910 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 A0A0D9SEW6 157 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 DRGXA6NNA5 263 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 PES1O00541 588 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 YKT6O15498 198 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 F9P00740 461 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 TAS2R38P59533 333 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 PIP5KL1Q5T9C9 394 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 TFAP2DQ7Z6R9 452 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 SETD3Q86TU7 594 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 ERICH1Q86X53 443 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 MARCH9Q86YJ5 346 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 TAB2Q9NYJ8 693 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 MPP6Q9NZW5 540 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 TMEM59LQ9UK28 342 aa17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 NOCTQ9UK39 431 aaKnown RBP17.83■□□□□ 0.44
CHMP1A-205ENST00000548650 E9PAM4 449 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 GOLGA8SH3BPF8 625 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 K7ERQ8 282 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 TLR4O00206 839 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 BNIP3LO60238 219 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 MMEP08473 750 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 RRM1P23921 792 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 MAT2AP31153 395 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 NUDT1P36639 197 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 KRT83P78385 493 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms