RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 FAM129BQ96TA1 746 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 NCAPGQ9BPX3 1015 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 DHX35Q9H5Z1 703 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 ATP13A1Q9HD20 1204 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 SPTLC3Q9NUV7 552 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 IP6K2Q9UHH9 426 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 HS3ST2Q9Y278 367 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 CFAP54Q96N23 3096 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 CBX4O00257 560 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ZMPSTE24O75844 475 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 IGLV3-19P01714 112 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 DNTTP04053 509 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 H2AFZP0C0S5 128 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 SRCP12931 536 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ACVRL1P37023 503 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ZBTB16Q05516 673 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 CCDC6Q16204 474 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 LINGO4Q6UY18 593 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 H2AFVQ71UI9 128 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ARMCX6Q7L4S7 300 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 STK40Q8N2I9 435 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 RTL3Q8N8U3 475 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ATP11CQ8NB49 1132 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ZNF564Q8TBZ8 553 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 CTNNBL1Q8WYA6 563 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 TOE1Q96GM8 510 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 ACE2Q9BYF1 805 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 SEMA4GQ9NTN9 838 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 WSB2Q9NYS7 404 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 GON4LQ3T8J9 2241 aa19.17■□□□□ 0.66
PRPF40B-206ENST00000547764 BCLAF3A2AJT9 711 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 EIF3CLB5ME19 914 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 K7ERQ8 282 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 MYO1FO00160 1098 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 RAMP2O60895 175 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 RNASEH1O60930 286 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 NDUFS2O75306 463 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 TCF4P15884 667 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 IL1R2P27930 398 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 OXTRP30559 389 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 ETFBP38117 255 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 MPLP40238 635 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 TPI1P60174 286 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 ELAVL3Q14576 367 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 CSRP2Q16527 193 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 IL31Q6EBC2 164 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 FAM124AQ86V42 546 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 PSTKQ8IV42 348 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 MMAAQ8IVH4 418 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 NIPA2Q8N8Q9 360 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 ARHGEF2Q92974 986 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 KCTD15Q96SI1 283 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 EIF3CQ99613 913 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 MAGEH1Q9H213 219 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 CATSPERBQ9H7T0 1116 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 CTTNBP2NLQ9P2B4 639 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 RALGAPA1Q6GYQ0 2036 aa19.16■□□□□ 0.66
PRPF40B-206ENST00000547764 WASH4PA8MWX3 477 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 FGF10O15520 208 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 SMAD6O43541 496 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 TMEM253P0C7T8 217 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 HTR7P34969 479 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 ARF5P84085 180 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 POLD3Q15054 466 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 CST6Q15828 149 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 PLA2G2CQ5R387 149 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 RETSATQ6NUM9 610 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 Q6ZVU0 165 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 CYP2U1Q7Z449 544 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 GPR174Q9BXC1 333 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 PABPC3Q9H361 631 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 SMOC1Q9H4F8 434 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 NOL6Q9H6R4 1146 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 UVRAGQ9P2Y5 699 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 SCML1Q9UN30 329 aa19.15■□□□□ 0.66
PRPF40B-206ENST00000547764 CHD5Q8TDI0 1954 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 EEF2KO00418 725 aaKnown RBP19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 MID1O15344 667 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 ZNF806P0C7X5 589 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 CLCN6P51797 869 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 ZNF33AQ06730 810 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 SLC20A2Q08357 652 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 SMTNL2Q2TAL5 461 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 TTC31Q49AM3 519 aaPredicted RBP19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 BOLA3Q53S33 107 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 PPP6R3Q5H9R7 873 aaPredicted RBP19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 KCNT1Q5JUK3 1230 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 LYSMD4Q5XG99 296 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 SLC41A1Q8IVJ1 513 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 PIGKQ92643 395 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 ZNF419Q96HQ0 510 aaPredicted RBP19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 ZWILCHQ9H900 591 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 ACTL7AQ9Y615 435 aa19.14■□□□□ 0.65
PRPF40B-206ENST00000547764 CEP192Q8TEP8 1941 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 NUP205Q92621 2012 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 BNIP3LO60238 219 aa19.13■□□□□ 0.65
PRPF40B-206ENST00000547764 CD160O95971 181 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms