RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GSTM5P46439 218 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 FOXG1P55316 489 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 IFI35P80217 286 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 GOLGA8FQ08AF8 430 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 MYO1EQ12965 1108 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 STK4Q13043 487 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 CEP78Q5JTW2 689 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 CERCAMQ5T4B2 595 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ZNF618Q5T7W0 954 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 TEDDM1Q5T9Z0 273 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 PRAMEF17Q5VTA0 474 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 RUSC1-AS1Q66K80 236 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 INO80CQ6PI98 192 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 CYP20A1Q6UW02 462 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 RASGRP2Q7LDG7 609 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 KRT27Q7Z3Y8 459 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 GALNTL5Q7Z4T8 443 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ZNF804AQ7Z570 1209 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 LRRC71Q8N4P6 559 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 LINS1Q8NG48 757 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ZCCHC10Q8TBK6 192 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 SLC22A17Q8WUG5 538 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ATRIPQ8WXE1 791 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 HMCESQ96FZ2 354 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ZDHHC12Q96GR4 267 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 REXO5Q96IC2 774 aaKnown RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 PIGSQ96S52 555 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ADGRE3Q9BY15 652 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 INTS2Q9H0H0 1204 aaKnown RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 RANBP17Q9H2T7 1088 aaKnown RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 MUC13Q9H3R2 512 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 STN1Q9H668 368 aaKnown RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 RMI1Q9H9A7 625 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 PLEKHA2Q9HB19 425 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 CCDC177Q9NQR7 707 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 CWC25Q9NXE8 425 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-210ENST00000547654 PPP1R14DQ9NXH3 145 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 ALKBH4Q9NXW9 302 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 NAALADL1Q9UQQ1 740 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 PSAT1Q9Y617 370 aa4.58□□□□□ -1.68
SCAF11-210ENST00000547654 KDM6BO15054 1643 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 PASKQ96RG2 1323 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SLC38A8A6NNN8 435 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 FYB1O15117 783 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 DHHO43323 396 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 HNRNPRO43390 633 aaKnown RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 TULP3O75386 442 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 BEST1O76090 585 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 TOP3BO95985 862 aaKnown RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 TUBB4AP04350 444 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SPARCP09486 303 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SNHG28P0DPA3 235 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 MUTP22033 750 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 NTSR1P30989 418 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 CCKBRP32239 447 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 BSGP35613 385 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 PPARGP37231 505 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 DGKEP52429 567 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 ZNF260Q3ZCT1 412 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SFRP4Q6FHJ7 346 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 DENND1BQ6P3S1 775 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 ANKRD16Q6P6B7 361 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 IQCA1Q86XH1 822 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 CNGA4Q8IV77 575 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SLC15A3Q8IY34 581 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SCFD2Q8WU76 684 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SOCS4Q8WXH5 440 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 FSD1LQ9BXM9 530 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 TRIM5Q9C035 493 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 TAOK3Q9H2K8 898 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 GRPEL1Q9HAV7 217 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 ARHGEF3Q9NR81 526 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 DUSP22Q9NRW4 184 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 HCFC1R1Q9NWW0 138 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 TUBA8Q9NY65 449 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 VPS51Q9UID3 782 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SERTAD3Q9UJW9 196 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 ISY1Q9ULR0 285 aaKnown RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 MRPS17Q9Y2R5 130 aaKnown RBP4.57□□□□□ -1.68
SCAF11-210ENST00000547654 SNX5Q9Y5X3 404 aa4.57□□□□□ -1.68
SCAF11-210ENST00000547654 AGAP14A8MT82 685 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 KCNU1A8MYU2 1149 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 SLC16A3O15427 465 aaKnown RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 INSIG1O15503 277 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 ERAL1O75616 437 aaKnown RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 BAG2O95816 211 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 ADRB2P07550 413 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 THBS4P35443 961 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 PSMB10P40306 273 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 EIF2DP41214 584 aaKnown RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 RGS2P41220 211 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 PNPLA4P41247 253 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 TNNT3P45378 269 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-210ENST00000547654 CLCN2P51788 898 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 CYP1B1Q16678 543 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 DUSP28Q4G0W2 176 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 CBWD5Q5RIA9 395 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 DEPDC1Q5TB30 811 aa4.56□□□□□ -1.68
SCAF11-210ENST00000547654 PXDC1Q5TGL8 231 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms