RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 SREK1Q8WXA9 508 aaKnown RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 MFSD3Q96ES6 412 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 MRPL1Q9BYD6 325 aaKnown RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 DRC3Q9H069 523 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 PRDM16Q9HAZ2 1276 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 ZDHHC2Q9UIJ5 367 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 VANGL2Q9ULK5 521 aa12.92□□□□□ -0.34
CACNB3-204ENST00000547230 MAGED2Q9UNF1 606 aaPredicted RBP12.92□□□□□ -0.34
CACNB3-204ENST00000547230 BTBD19C9JJ37 291 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 HBP1O60381 514 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 BCAS2O75934 225 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 VTNP04004 478 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 CAPNS1P04632 268 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 FAM200BP0CF97 657 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 ME2P23368 584 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 SLC5A2P31639 672 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 SULT1E1P49888 294 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 SNX16P57768 344 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 CREB5Q02930 508 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 PDK1Q15118 436 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 ARL13AQ5H913 290 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 OTUD1Q5VV17 481 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 STRADAQ7RTN6 431 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 FAM156AQ8NDB6 213 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 PDCD6IPQ8WUM4 868 aaKnown RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 hCG_2014768A0A024R1R8 64 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 SYNJ2BP-COX16A0A087WUM0 186 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 ACOT8O14734 319 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 RNASEH2AO75792 299 aaKnown RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 PGK2P07205 417 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 CDK4P11802 303 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 BST2Q10589 180 aaKnown RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 ARHGAP17Q68EM7 881 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 NXNQ6DKJ4 435 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 ZYG11AQ6WRX3 759 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 SETD3Q86TU7 594 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 TMEM151AQ8N4L1 468 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 DLG3Q92796 817 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 KLRG1Q96E93 195 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 NPAS2Q99743 824 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 MCMBPQ9BTE3 642 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 C1QTNF1Q9BXJ1 281 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 SMARCAD1Q9H4L7 1026 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 TASP1Q9H6P5 420 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 COX16Q9P0S2 106 aa12.91□□□□□ -0.34
CACNB3-204ENST00000547230 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 RCOR3Q9P2K3 495 aaPredicted RBP12.91□□□□□ -0.34
CACNB3-204ENST00000547230 GOLGA8TH3BQL2 631 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 H3BSA7 217 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 SLC22A2O15244 555 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 TRPA1O75762 1119 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 VAPBO95292 243 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 TFEBP19484 476 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 TCN1P20061 433 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-204ENST00000547230 GLRBP48167 497 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 HSPA13P48723 471 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 CLCN2P51788 898 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 MPP3Q13368 585 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 HERC3Q15034 1050 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 KIZQ2M2Z5 673 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 LIPMQ5VYY2 423 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 ZNF410Q86VK4 478 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 KCNMB4Q86W47 210 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 DEFB106AQ8N104 65 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 LSMEM2Q8N112 164 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 TMA16Q96EY4 203 aaKnown RBP12.9□□□□□ -0.34
CACNB3-204ENST00000547230 ZBTB26Q9HCK0 441 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 SLC39A10Q9ULF5 831 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 CDYLQ9Y232 598 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 AKT3Q9Y243 479 aa12.9□□□□□ -0.34
CACNB3-204ENST00000547230 TSPAN1O60635 241 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 AP2A1O95782 977 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 ZNF26P17031 533 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-204ENST00000547230 PTPN3P26045 913 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 SCNN1AP37088 669 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 BCAT1P54687 386 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 NAGLUP54802 743 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 GRM3Q14832 879 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-204ENST00000547230 PSTKQ8IV42 348 aaKnown RBP12.89□□□□□ -0.35
CACNB3-204ENST00000547230 CHERPQ8IWX8 916 aaKnown RBP12.89□□□□□ -0.35
CACNB3-204ENST00000547230 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 DDI1Q8WTU0 396 aa12.89□□□□□ -0.35
CACNB3-204ENST00000547230 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
CACNB3-204ENST00000547230 IL22Q9GZX6 179 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms