RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 STK19P49842 368 aaPredicted RBP17.2■□□□□ 0.34
CCDC38-203ENST00000546803 NAP1L1P55209 391 aaKnown RBP17.2■□□□□ 0.34
CCDC38-203ENST00000546803 GEMIN4P57678 1058 aaKnown RBP17.2■□□□□ 0.34
CCDC38-203ENST00000546803 GSE1Q14687 1217 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 IFI16Q16666 785 aaKnown RBP17.2■□□□□ 0.34
CCDC38-203ENST00000546803 ATP13A4Q4VNC1 1196 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 ZFYVE27Q5T4F4 411 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 RHOT1Q8IXI2 618 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 PGBD3Q8N328 593 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 SH2D3CQ8N5H7 860 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 MDGA1Q8NFP4 955 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 OR2T3Q8NH03 318 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 TPCN2Q8NHX9 752 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 HMGB4Q8WW32 186 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF670Q9BS34 389 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 SEMA4AQ9H3S1 761 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 NOL6Q9H6R4 1146 aaKnown RBP17.2■□□□□ 0.34
CCDC38-203ENST00000546803 PRSS16Q9NQE7 514 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 RAPGEFL1Q9UHV5 662 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 SALL4Q9UJQ4 1053 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 ADGRG1Q9Y653 693 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
CCDC38-203ENST00000546803 ZSCAN5CA6NGD5 496 aaPredicted RBP17.19■□□□□ 0.34
CCDC38-203ENST00000546803 RASA4BC9J798 803 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 RASA4O43374 803 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 KDELR3O43731 214 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 C7P10643 843 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 BYSLQ13895 437 aaKnown RBP17.19■□□□□ 0.34
CCDC38-203ENST00000546803 USP39Q53GS9 565 aaKnown RBP17.19■□□□□ 0.34
CCDC38-203ENST00000546803 VSIG1Q86XK7 387 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 TMPRSS6Q8IU80 811 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF366Q8N895 744 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 ATP11CQ8NB49 1132 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 FRS2Q8WU20 508 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 MRGPRX1Q96LB2 322 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 CALN1Q9BXU9 219 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 TSGA10Q9BZW7 698 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 LRRC19Q9H756 370 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
CCDC38-203ENST00000546803 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
CCDC38-203ENST00000546803 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 TTC34A8MYJ7 566 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF487B1APH4 448 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 DCLK1O15075 740 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 PSTPIP1O43586 416 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 BUB1O43683 1085 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 SRCP12931 536 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 NDUFV2P19404 249 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 AMPD1P23109 780 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 IL4RP24394 825 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 SERPINB6P35237 376 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 NBL1P41271 181 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 NUMBP49757 651 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 ARF5P84085 180 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 CCZ1BP86790 482 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 CCZ1P86791 482 aaPredicted RBP17.18■□□□□ 0.34
CCDC38-203ENST00000546803 DPYSL3Q14195 570 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 DLG2Q15700 870 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 ACCSLQ4AC99 568 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 C9orf64Q5T6V5 341 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 AFMIDQ63HM1 303 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 DAAM2Q86T65 1068 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 METTL3Q86U44 580 aaKnown RBP17.18■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF354CQ86Y25 554 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 HMCESQ96FZ2 354 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 CEP44Q9C0F1 390 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 KLC2Q9H0B6 622 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 PRDM16Q9HAZ2 1276 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 HYOU1Q9Y4L1 999 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 R4GN57 208 aa17.18■□□□□ 0.34
CCDC38-203ENST00000546803 SIN3BO75182 1162 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 ZNF217O75362 1048 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 MT-CO1P00395 513 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 CD48P09326 243 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 GLDCP23378 1020 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 KDELR1P24390 212 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 SERPINH1P50454 418 aaKnown RBP17.17■□□□□ 0.34
CCDC38-203ENST00000546803 COPAP53621 1224 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 NHLH1Q02575 133 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 ZBTB16Q05516 673 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 SERINC3Q13530 473 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 ODF2Q5BJF6 829 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 LINGO4Q6UY18 593 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 C11orf74Q86VG3 221 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 RNF10Q8N5U6 811 aaKnown RBP17.17■□□□□ 0.34
CCDC38-203ENST00000546803 GAB3Q8WWW8 586 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 CASKIN2Q8WXE0 1202 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 RAPGEF5Q92565 580 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 PRCCQ92733 491 aaPredicted RBP17.17■□□□□ 0.34
CCDC38-203ENST00000546803 PTPRN2Q92932 1015 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 FAF2Q96CS3 445 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 SIPA1Q96FS4 1042 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 CCDC114Q96M63 670 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 SLC39A8Q9C0K1 460 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 MKRN2Q9H000 416 aaKnown RBP17.17■□□□□ 0.34
CCDC38-203ENST00000546803 MTG2Q9H4K7 406 aa17.17■□□□□ 0.34
CCDC38-203ENST00000546803 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCDC38-203ENST00000546803 LRRD1A4D1F6 860 aa17.16■□□□□ 0.34
CCDC38-203ENST00000546803 HRO43593 1189 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms