RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SEMG2Q02383 582 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 GALNT2Q10471 571 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 HHATQ5VTY9 493 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 ADGRD1Q6QNK2 874 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 RBM23Q86U06 439 aaKnown RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 CCDC63Q8NA47 563 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 SLC22A17Q8WUG5 538 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 BADQ92934 168 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 C8orf48Q96LL4 319 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 STMN4Q9H169 189 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 HCFC1R1Q9NWW0 138 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 SAMD15Q9P1V8 674 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 TLR6Q9Y2C9 796 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 KCTD3Q9Y597 815 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 ZFP37Q9Y6Q3 630 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 AURKAO14965 403 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 PER2O15055 1255 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 MUSKO15146 869 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 TPGS1Q6ZTW0 290 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 BZW1Q7L1Q6 419 aaKnown RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 PSTKQ8IV42 348 aaKnown RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 DENND6AQ8IWF6 608 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 TNS4Q8IZW8 715 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 MAB21L3Q8N8X9 362 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 MICAL1Q8TDZ2 1067 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 SLC44A1Q8WWI5 657 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 TEKT5Q96M29 485 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 NCAPGQ9BPX3 1015 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
CCDC38-202ENST00000546386 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
CCDC38-202ENST00000546386 OR6C75A6NL08 312 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 HIDE1A8MVS5 230 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 TBC1D4O60343 1298 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 RFPL2O75678 378 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 CXCL10P02778 98 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ABHD2P08910 425 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 GBP2P32456 591 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 CGB2Q6NT52 195 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 TMC7Q7Z402 723 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 RASSF3Q86WH2 238 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 MZB1Q8WU39 189 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 PDCD6IPQ8WUM4 868 aaKnown RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 FSD1LQ9BXM9 530 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 C11orf49Q9H6J7 331 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 SUDS3Q9H7L9 328 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 IARS2Q9NSE4 1012 aaKnown RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ABCF3Q9NUQ8 709 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ZFATQ9P243 1243 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 RCOR3Q9P2K3 495 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 LGALS13Q9UHV8 139 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 GREB1Q4ZG55 1949 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 DMDP11532 3685 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF840PA6NDX5 716 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 OR51F1A6NGY5 319 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 A8MX80 341 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 CBX4O00257 560 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 TYROBPO43914 113 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 VAPBO95292 243 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 HMGA1P17096 107 aaKnown RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 BGNP21810 368 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 SERPINB6P35237 376 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 PRMT2P55345 433 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 GALNT3Q14435 633 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 FSCBQ5H9T9 825 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ESRP1Q6NXG1 681 aaKnown RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 PDZD4Q76G19 769 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 DNAJB7Q7Z6W7 309 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 GSDMBQ8TAX9 411 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 HDAC11Q96DB2 347 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
CCDC38-202ENST00000546386 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 C20orf96Q9NUD7 363 aaPredicted RBP12.19□□□□□ -0.46
CCDC38-202ENST00000546386 COL4A6Q14031 1691 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ARHGEF37A1IGU5 675 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 HACD1B0YJ81 288 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 TAC1P20366 129 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CORO1AP31146 461 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ATP5C1P36542 298 aaKnown RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 MAGEA3P43357 314 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 ALDH1A3P47895 512 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 PDE1BQ01064 536 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 POLD3Q15054 466 aaPredicted RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CNGA3Q16281 694 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 EMC10Q5UCC4 262 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
CCDC38-202ENST00000546386 SLC26A11Q86WA9 606 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms