RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SCN4AP35499 1836 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 E7ESA3 106 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 NOP56O00567 594 aaKnown RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 TSPAN1O60635 241 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 RSL1D1O76021 490 aaKnown RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 ATG7O95352 703 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 BMP10O95393 424 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 LSM8O95777 96 aaKnown RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 CALB1P05937 261 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 CPOXP36551 454 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 BMPR1AP36894 532 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 CTAG1AP78358 180 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 TAZQ16635 292 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 LSM12Q3MHD2 195 aaKnown RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 CYP4A22Q5TCH4 519 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 ANKRD26P1Q6NSI1 321 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 ZC3H7AQ8IWR0 971 aaKnown RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 ZNF784Q8NCA9 323 aaPredicted RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 APPL2Q8NEU8 664 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 NPLOC4Q8TAT6 608 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 DCAKDQ8WVC6 231 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 TMEM79Q9BSE2 394 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 FRMD8Q9BZ67 464 aaPredicted RBP8.03□□□□□ -1.12
UBR1-202ENST00000546274 IFT122Q9HBG6 1241 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 VPS45Q9NRW7 570 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 CYTH4Q9UIA0 394 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 ZNF229Q9UJW7 825 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 ADAMTS5Q9UNA0 930 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 ARHGAP26Q9UNA1 814 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 CROCCQ5TZA2 2017 aa8.03□□□□□ -1.12
UBR1-202ENST00000546274 K7ERI5 159 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SGK1O00141 431 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 TMEM63AO94886 807 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 INHBBP09529 407 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 MAP4P27816 1152 aaKnown RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 S100A5P33763 92 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 KRT6CP48668 564 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 FSTL1Q12841 308 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 OXA1LQ15070 435 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 HIF1AQ16665 826 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 ATAD3BQ5T9A4 648 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 NEK5Q6P3R8 708 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 OTOP3Q7RTS5 596 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 BANPQ8N9N5 519 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 PSD4Q8NDX1 1056 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 TANKQ92844 425 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 ALPK1Q96QP1 1244 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 PSKH2Q96QS6 385 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 CDK5RAP1Q96SZ6 601 aaKnown RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 EBF4Q9BQW3 602 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 MECRQ9BV79 373 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 PPCSQ9HAB8 311 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 MYOZ2Q9NPC6 264 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 PSMD13Q9UNM6 376 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SSC5DA1L4H1 1573 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 LRRIQ4A6NIV6 560 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 LPXNO60711 386 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 NOL3O60936 208 aaKnown RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 LRCH4O75427 683 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 FGFR3P22607 806 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 MYL6P60660 151 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 CAPSQ13938 189 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 PIGHQ14442 188 aaPredicted RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 SMTNL2Q2TAL5 461 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 WDR78Q5VTH9 848 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SLFN12LQ6IEE8 588 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 GPAT2Q6NUI2 795 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 DNAJC24Q6P3W2 148 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 LYSMD3Q7Z3D4 306 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 POLNQ7Z5Q5 900 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 ZNF786Q8N393 782 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 RNF148Q8N7C7 305 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 KBTBD7Q8WVZ9 684 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 TRUB1Q8WWH5 349 aaKnown RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 MAP6Q96JE9 813 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 PAFAH2Q99487 392 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SLC2A11Q9BYW1 496 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 IMPG2Q9BZV3 1241 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SEMA6AQ9H2E6 1030 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 STN1Q9H668 368 aaKnown RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 ACSS3Q9H6R3 686 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 GPBP1L1Q9HC44 474 aaPredicted RBP8.02□□□□□ -1.13
UBR1-202ENST00000546274 CISHQ9NSE2 258 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 GDAP2Q9NXN4 497 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 COQ3Q9NZJ6 369 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 ANKMY1Q9P2S6 941 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 SQORQ9Y6N5 450 aa8.02□□□□□ -1.13
UBR1-202ENST00000546274 CENPBD1B2RD01 187 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 MEN1O00255 615 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 SNPHO15079 494 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 USP12O75317 370 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 MFN2O95140 757 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 IFNB1P01574 187 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 COL6A1P12109 1028 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 RPL22P35268 128 aaKnown RBP8.01□□□□□ -1.13
UBR1-202ENST00000546274 ASPAP45381 313 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 GNG2P59768 71 aa8.01□□□□□ -1.13
UBR1-202ENST00000546274 RACK1P63244 317 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms