RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TFEBP19484 476 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 ABCG1P45844 678 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 CCR10P46092 362 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 STT3AP46977 705 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 NDST2P52849 883 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 OAZ1P54368 228 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 TUBA4AP68366 448 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 ARL13AQ5H913 290 aaPredicted RBP14.46□□□□□ -0.09
SRP54-202ENST00000546080 MYO1HQ8N1T3 1032 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.46□□□□□ -0.09
SRP54-202ENST00000546080 KHSRPQ92945 711 aaKnown RBP eCLIP14.46□□□□□ -0.099e-8■□□□□ 9.3
SRP54-202ENST00000546080 PGLYRP2Q96PD5 576 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 NT5C1AQ9BXI3 368 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 ACE2Q9BYF1 805 aaPredicted RBP14.46□□□□□ -0.09
SRP54-202ENST00000546080 VRTNQ9H8Y1 702 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 LRRC40Q9H9A6 602 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 KIAA1257Q9ULG3 409 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 PCDHGA4Q9Y5G9 962 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 PSME4Q14997 1843 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 MGAMO43451 1857 aa14.46□□□□□ -0.09
SRP54-202ENST00000546080 COL11A1P12107 1806 aaPredicted RBP14.46□□□□□ -0.1
SRP54-202ENST00000546080 C8BP07358 591 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 GOT1P17174 413 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 UBA1P22314 1058 aaKnown RBP14.46□□□□□ -0.1
SRP54-202ENST00000546080 GTF2A2P52657 109 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 INCA1Q0VD86 236 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 C16orf72Q14CZ0 275 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 ZYG11AQ6WRX3 759 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 PTAR1Q7Z6K3 402 aaPredicted RBP14.46□□□□□ -0.1
SRP54-202ENST00000546080 RIN3Q8TB24 985 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 TSNARE1Q96NA8 513 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 AGAP2Q99490 1192 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 IL22Q9GZX6 179 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 TASP1Q9H6P5 420 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 MRPL40Q9NQ50 206 aaKnown RBP14.46□□□□□ -0.1
SRP54-202ENST00000546080 SUCOQ9UBS9 1254 aaKnown RBP14.46□□□□□ -0.1
SRP54-202ENST00000546080 ZNHIT2Q9UHR6 403 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 ZDHHC2Q9UIJ5 367 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 ZNF711Q9Y462 761 aa14.46□□□□□ -0.1
SRP54-202ENST00000546080 COPG1Q9Y678 874 aaKnown RBP14.46□□□□□ -0.1
SRP54-202ENST00000546080 PTPRFP10586 1907 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 TK2O00142 265 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 PAPSS1O43252 624 aaPredicted RBP14.45□□□□□ -0.1
SRP54-202ENST00000546080 MFSD11O43934 449 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 SUPT3HO75486 399 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 ARL4AP40617 200 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 CD97P48960 835 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 ENTPD1P49961 510 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 PRKAA2P54646 552 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 NSUN2Q08J23 767 aaKnown RBP eCLIP14.45□□□□□ -0.1
SRP54-202ENST00000546080 IFRD2Q12894 506 aaPredicted RBP14.45□□□□□ -0.1
SRP54-202ENST00000546080 TMEM132BQ14DG7 1078 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 Q6ZNX1 250 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 GPR141Q7Z602 305 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 RDH11Q8TC12 318 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 HM13Q8TCT9 377 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 GRIN3AQ8TCU5 1115 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 STON2Q8WXE9 905 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 P2RY11Q96G91 374 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 CLK4Q9HAZ1 481 aaKnown RBP14.45□□□□□ -0.1
SRP54-202ENST00000546080 FAM49BQ9NUQ9 324 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 OLAHQ9NV23 265 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 SNX13Q9Y5W8 968 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 FER1L6Q2WGJ9 1857 aa14.45□□□□□ -0.1
SRP54-202ENST00000546080 PARP14Q460N5 1801 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TCAF2A6NFQ2 919 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TTC36A6NLP5 189 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 C9IYK1 514 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TIMM44O43615 452 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 GAS2O43903 313 aaKnown RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 FARP2O94887 1054 aaPredicted RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 PTPN9P43378 593 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 PSME3P61289 254 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 ESRRGP62508 458 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TRIM25Q14258 630 aaKnown RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 SLC44A4Q53GD3 710 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 MTX3Q5HYI7 312 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 PPP1R26Q5T8A7 1209 aaPredicted RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 FIBCD1Q8N539 461 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 CCDC185Q8N715 623 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 NETO2Q8NC67 525 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 OR52K1Q8NGK4 314 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 CXorf38Q8TB03 319 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 RANBP9Q96S59 729 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 B3GNT5Q9BYG0 378 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 PCDHAC1Q9H158 963 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 SLC8A2Q9UPR5 921 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 HES2Q9Y543 173 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 BMP10O95393 424 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 STAG3L1P0CL83 205 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 NAGLUP54802 743 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 SNX16P57768 344 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 RHDQ02161 417 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 PLOD1Q02809 727 aaPredicted RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 FSTL1Q12841 308 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 MPP3Q13368 585 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 OLIG2Q13516 323 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 KIZQ2M2Z5 673 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms