RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 CES2O00748 559 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TGFB1I1O43294 461 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TNFSF14O43557 240 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 GUCY1B2O75343 617 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 SGPL1O95470 568 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ONECUT2O95948 504 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 SCGB1D1O95968 90 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TNNT1P13805 278 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ZNF37AP17032 561 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 IGFBP2P18065 325 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 CD38P28907 300 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 GALNSP34059 522 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 HOXD12P35452 270 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 CLK3P49761 638 aaKnown RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 MVDP53602 400 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 PDE1AP54750 535 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 CDH15P55291 814 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TPTEP56180 551 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ARF3P61204 181 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 GPC5P78333 572 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ARF1P84077 181 aaKnown RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 EIF4A2Q14240 407 aaKnown RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TXNRD1Q16881 649 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ZNF766Q5HY98 468 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 COLEC12Q5KU26 742 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 SH2D4BQ5SQS7 431 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TTLL5Q6EMB2 1281 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 KYAT3Q6YP21 454 aaKnown RBP4.45□□□□□ -1.7
SNHG1-222ENST00000545308 LSMEM1Q8N8F7 131 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ZCCHC10Q8TBK6 192 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 UBE2Q2Q8WVN8 375 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ALG8Q9BVK2 526 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 PCDHB16Q9NRJ7 776 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 ABHD10Q9NUJ1 306 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 HAUS2Q9NVX0 235 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 KCTD5Q9NXV2 234 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TAS2R10Q9NYW0 307 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 EHD3Q9NZN3 535 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 KLQ9UEF7 1012 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 VPS28Q9UK41 221 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TTLL3Q9Y4R7 772 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 SRCAPQ6ZRS2 3230 aa4.45□□□□□ -1.7
SNHG1-222ENST00000545308 TMEM94Q12767 1356 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 NPIPB15A6NHN6 443 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 TSPAN4O14817 238 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 YY2O15391 372 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 TMPRSS11DO60235 418 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 TJP3O95049 919 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 URODP06132 367 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ACADMP11310 421 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 LAMP2P13473 410 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ZFXP17010 805 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ALOX12P18054 663 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 PRPH2P23942 346 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ACTN2P35609 894 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 MLH1P40692 756 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 TXNL4AP83876 142 aaKnown RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 CCDC15Q0P6D6 951 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 LMAN2Q12907 356 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 MPP3Q13368 585 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 GAB1Q13480 694 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 DCTN2Q13561 401 aaKnown RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 BMPR2Q13873 1038 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 PTPRRQ15256 657 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 RUNDC3AQ59EK9 446 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ZKSCAN2Q63HK3 967 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 NAPEPLDQ6IQ20 393 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ADGRG6Q86SQ4 1221 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 MON1AQ86VX9 555 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ARHGEF19Q8IW93 802 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 FAM9BQ8IZU0 186 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ADSSL1Q8N142 457 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 SIRT6Q8N6T7 355 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ZNF366Q8N895 744 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 RFWD2Q8NHY2 731 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 KCNJ9Q92806 393 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 CUL5Q93034 780 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 SH3KBP1Q96B97 665 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 EDC3Q96F86 508 aaKnown RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 PERPQ96FX8 193 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 NAF1Q96HR8 494 aaKnown RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 KAZALD1Q96I82 304 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 FBXL20Q96IG2 436 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 PBKQ96KB5 322 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 TIGD1Q96MW7 591 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 NR1H4Q96RI1 486 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 EYA3Q99504 573 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.74e-59■■■□□ 16.1
SNHG1-222ENST00000545308 HDHD5Q9BXW7 423 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 WDR11Q9BZH6 1224 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 CCDC68Q9H2F9 335 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 PDCL3Q9H2J4 239 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 USP29Q9HBJ7 922 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 PLSCR4Q9NRQ2 329 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 SEPT11Q9NVA2 429 aaKnown RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 TBCCD1Q9NVR7 557 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 BEX4Q9NWD9 120 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 SYBUQ9NX95 663 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms