RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 PYDC2Q56P42 97 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 TRMT2AQ8IZ69 625 aaKnown RBP20.33■□□□□ 0.85
BPTF-208ENST00000544778 ANKRD6Q9Y2G4 727 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 H3BRB1 525 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 YBX3P16989 372 aaKnown RBP eCLIP20.33■□□□□ 0.852e-10■■■■□ 23.4
BPTF-208ENST00000544778 DGCR6Q14129 220 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 SMU1Q2TAY7 513 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 ZNF518BQ9C0D4 1074 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 TUT1Q9H6E5 874 aaKnown RBP20.33■□□□□ 0.85
BPTF-208ENST00000544778 NRDE2Q9H7Z3 1164 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 KLQ9UEF7 1012 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 TMA7Q9Y2S6 64 aaKnown RBP20.33■□□□□ 0.85
BPTF-208ENST00000544778 ZNF609O15014 1411 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 ACADLP28330 430 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 NFIAQ12857 509 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 ZDHHC13Q8IUH4 622 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 TC2NQ8N9U0 490 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 TRNT1Q96Q11 434 aaKnown RBP20.33■□□□□ 0.85
BPTF-208ENST00000544778 ERVK-7P63135 1459 aa20.33■□□□□ 0.85
BPTF-208ENST00000544778 FAM86B2P0C5J1 330 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 SERPINA4P29622 427 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 CCZ1BP86790 482 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 CCZ1P86791 482 aaPredicted RBP20.33■□□□□ 0.84
BPTF-208ENST00000544778 FBXO30Q8TB52 745 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 ZBTB10Q96DT7 871 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 SEMA4BQ9NPR2 832 aaPredicted RBP20.33■□□□□ 0.84
BPTF-208ENST00000544778 XPNPEP3Q9NQH7 507 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 A0A0B4J269 797 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 TNFRSF21O75509 655 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 AKT2P31751 481 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 OR6Y1Q8NGX8 325 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 SERPINB11Q96P15 392 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 AGO4Q9HCK5 861 aaKnown RBP20.33■□□□□ 0.84
BPTF-208ENST00000544778 CLOCKO15516 846 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 SCN2BO60939 215 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 EPS8Q12929 822 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 USP49Q70CQ1 688 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 NOA1Q8NC60 698 aaKnown RBP20.33■□□□□ 0.84
BPTF-208ENST00000544778 TKTL2Q9H0I9 626 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 COPG2Q9UBF2 871 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 NUDT5Q9UKK9 219 aa20.33■□□□□ 0.84
BPTF-208ENST00000544778 GPC6Q9Y625 555 aaPredicted RBP20.33■□□□□ 0.84
BPTF-208ENST00000544778 H2AFXP16104 143 aaPredicted RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 RAB27AP51159 221 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 MTA1Q13330 715 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 HYIQ5T013 277 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 A0A087X1B8 175 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 ARF4P18085 180 aaPredicted RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 MMP13P45452 471 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 SCTRP47872 440 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 SUZ12Q15022 739 aaKnown RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 KCNN2Q9H2S1 579 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 KCNF1Q9H3M0 494 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 BNC1Q01954 994 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 AP5B1Q2VPB7 878 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 FAM124AQ86V42 546 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 ACER1Q8TDN7 264 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 SYTL5Q8TDW5 730 aaPredicted RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 NUAK2Q9H093 628 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 CLN6Q9NWW5 311 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 PTGFRNQ9P2B2 879 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 CCNA2P20248 432 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 HNRNPH1P31943 449 aaKnown RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 ZNF276Q8N554 614 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 CORO1BQ9BR76 489 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 TTLL2Q9BWV7 592 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 FAM92AA1XBS5 289 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 PGAM1P18669 254 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 RGS1Q08116 209 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 MZT2BQ6NZ67 158 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 NANOGNBQ7Z5D8 188 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 DDX18Q9NVP1 670 aaKnown RBP20.32■□□□□ 0.84
BPTF-208ENST00000544778 BTN3A3O00478 584 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 IL1BP01584 269 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 NEK3P51956 506 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 TNS3Q68CZ2 1445 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 BPIFA1Q9NP55 256 aa20.32■□□□□ 0.84
BPTF-208ENST00000544778 STX16-NPEPL1H3BU86 382 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 STX16O14662 325 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 NKRFO15226 690 aaKnown RBP eCLIP20.31■□□□□ 0.84
BPTF-208ENST00000544778 CCSAPQ6IQ19 270 aaPredicted RBP20.31■□□□□ 0.84
BPTF-208ENST00000544778 SELENOMQ8WWX9 145 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 DGKAP23743 735 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 CLVS1Q8IUQ0 354 aaPredicted RBP20.31■□□□□ 0.84
BPTF-208ENST00000544778 RAD51AP1Q96B01 352 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 MARK4Q96L34 752 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 CYP3A43Q9HB55 503 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 CDHR5Q9HBB8 845 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 OGDHLQ9ULD0 1010 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 S100A9P06702 114 aaKnown RBP20.31■□□□□ 0.84
BPTF-208ENST00000544778 MYOCQ99972 504 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 INTS7Q9NVH2 962 aaKnown RBP20.31■□□□□ 0.84
BPTF-208ENST00000544778 MAGEB3O15480 346 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 CCNYL3P0C7X3 344 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 IDH2P48735 452 aaKnown RBP20.31■□□□□ 0.84
BPTF-208ENST00000544778 BCAP31P51572 246 aa20.31■□□□□ 0.84
BPTF-208ENST00000544778 ACSM2AQ08AH3 577 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms