RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CHURC1-FNTBB4DL54 471 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 NPC1O15118 1278 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 DDX3YO15523 660 aaKnown RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 ATG13O75143 517 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 SRPRAP08240 638 aaKnown RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 AVPR2P30518 371 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 NTSR1P30989 418 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 SERPINB6P35237 376 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 IL12RB1P42701 662 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 WASP42768 502 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 CDKN2BP42772 138 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 STK19P49842 368 aaPredicted RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 TAZQ16635 292 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 HSF5Q4G112 596 aaPredicted RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 FNDC3BQ53EP0 1204 aaKnown RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 MEI1Q5TIA1 1274 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 AFMIDQ63HM1 303 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 SERPINA13PQ6UXR4 307 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 TRMT11Q7Z4G4 463 aaKnown RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 RFX6Q8HWS3 928 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 ARHGAP12Q8IWW6 846 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 ACDQ96AP0 544 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 RPL10LQ96L21 214 aaKnown RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 MRGPRX3Q96LB0 322 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 IER2Q9BTL4 223 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 POLR3BQ9NW08 1133 aaPredicted RBP13.94□□□□□ -0.18
SP140-213ENST00000543928 C2orf42Q9NWW7 574 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 SLC25A13Q9UJS0 675 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 STON1Q9Y6Q2 735 aa13.94□□□□□ -0.18
SP140-213ENST00000543928 hCG_1818297A0A087WSY0 165 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 WASH3PC4AMC7 463 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 SGK1O00141 431 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 DFFAO00273 331 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 APOL1O14791 398 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 KDELR3O43731 214 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 MFSD11O43934 449 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 KIF5CO60282 957 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 ADAM23O75077 832 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 ZMPSTE24O75844 475 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 KRT10P13645 584 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 HLA-EP13747 358 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 PAPOLAP51003 745 aaKnown RBP13.93□□□□□ -0.18
SP140-213ENST00000543928 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 ARF5P84085 180 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 SERINC3Q13530 473 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 PAFAH1B3Q15102 231 aaKnown RBP13.93□□□□□ -0.18
SP140-213ENST00000543928 RPS6KA1Q15418 735 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 TFDP3Q5H9I0 405 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 EOGTQ5NDL2 527 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 KAZNQ674X7 775 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 SDE2Q6IQ49 451 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 LINGO4Q6UY18 593 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 TP53INP2Q8IXH6 220 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 MYO19Q96H55 970 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 SPATA6Q9NWH7 488 aaPredicted RBP13.93□□□□□ -0.18
SP140-213ENST00000543928 SLCO3A1Q9UIG8 710 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 HPCAL4Q9UM19 191 aa13.93□□□□□ -0.18
SP140-213ENST00000543928 MUC22E2RYF6 1773 aaPredicted RBP13.93□□□□□ -0.18
SP140-213ENST00000543928 MT-CO1P00395 513 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 PYGMP11217 842 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 HOXB2P14652 356 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 ZFXP17010 805 aaPredicted RBP13.92□□□□□ -0.18
SP140-213ENST00000543928 PRKCHP24723 683 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 NNMTP40261 264 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 COPS2P61201 443 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 DYNLT1P63172 113 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 GBE1Q04446 702 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 ZNF211Q13398 564 aaPredicted RBP13.92□□□□□ -0.18
SP140-213ENST00000543928 ENPP2Q13822 863 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 TFDP2Q14188 446 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 PPP2R5EQ16537 467 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 ZNF569Q5MCW4 686 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 DCAF12L1Q5VU92 463 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 LEKR1Q6ZMV7 388 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 SYT13Q7L8C5 426 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 ZNF366Q8N895 744 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 KDM1BQ8NB78 822 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 GABRG3Q99928 467 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 TMEM245Q9H330 911 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 PRDM16Q9HAZ2 1276 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 HS3ST2Q9Y278 367 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 RAD54BQ9Y620 910 aa13.92□□□□□ -0.18
SP140-213ENST00000543928 CACNA1IQ9P0X4 2223 aa13.91□□□□□ -0.18
SP140-213ENST00000543928 ZSCAN5CA6NGD5 496 aaPredicted RBP13.91□□□□□ -0.18
SP140-213ENST00000543928 TTC34A8MYJ7 566 aa13.91□□□□□ -0.18
SP140-213ENST00000543928 K7ERQ8 282 aa13.91□□□□□ -0.18
SP140-213ENST00000543928 CST8O60676 142 aa13.91□□□□□ -0.18
SP140-213ENST00000543928 MAP3K6O95382 1288 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms