RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 KREMEN1Q96MU8 473 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 ZNF578Q96N58 590 aaPredicted RBP20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 FEM1AQ9BSK4 669 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 SLC25A13Q9UJS0 675 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 PCDHB1Q9Y5F3 818 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 ZNF462Q96JM2 2506 aa20.52■□□□□ 0.87
LPCAT3-211ENST00000543794 CAPN8A6NHC0 703 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 E5RJQ4 531 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 THEGLP0DJG4 465 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 SLC2A3P11169 496 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 KCNMA1Q12791 1236 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 POM121L1PQ3SYA9 428 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 HS1BP3Q53T59 392 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 NEK5Q6P3R8 708 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 FMR1NBQ8N0W7 255 aaPredicted RBP20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 OR52K2Q8NGK3 314 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 HIC2Q96JB3 615 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 LGMNQ99538 433 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 GTPBP4Q9BZE4 634 aaKnown RBP20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 UCKL1Q9NWZ5 548 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 OR51B4Q9Y5P0 310 aa20.51■□□□□ 0.87
LPCAT3-211ENST00000543794 ERVH48-1M5A8F1 160 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 SLC31A1O15431 190 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 SMC2O95347 1197 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 GIMD1P0DJR0 217 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 CKMT1AP12532 417 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 ZNF18P17022 549 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 CCR1P32246 355 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 TAF5Q15542 800 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 PIP5KL1Q5T9C9 394 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 Q6ZVU0 165 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 LSMEM2Q8N112 164 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 SH2D3CQ8N5H7 860 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 WBP1Q96G27 269 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 DHTKD1Q96HY7 919 aaPredicted RBP20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 ATP6V1DQ9Y5K8 247 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 ATMQ13315 3056 aa20.5■□□□□ 0.87
LPCAT3-211ENST00000543794 A0A1W2PQU0 124 aa20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 OPA1O60313 960 aa20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 DXOO77932 396 aaKnown RBP20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 PCBP4P57723 403 aaKnown RBP20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 CDK17Q00537 523 aa20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 AUHQ13825 339 aaKnown RBP20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 CCDC40Q4G0X9 1142 aa20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 ZNF606Q8WXB4 792 aa20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 RPRD1AQ96P16 312 aaPredicted RBP20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
LPCAT3-211ENST00000543794 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 PSMA7O14818 248 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 MED7O43513 233 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 PIAS2O75928 621 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 MPOP05164 745 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 GLI1P08151 1106 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 KRT5P13647 590 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 PRLRP16471 622 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 LSSP48449 732 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 CENPCQ03188 943 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 CCDC15Q0P6D6 951 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 ZNF177Q13360 481 aaPredicted RBP20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 ZNF284Q2VY69 593 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 TMC6Q7Z403 805 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 HORMAD1Q86X24 394 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 KLK6Q92876 244 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 SMARCE1Q969G3 411 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 NAF1Q96HR8 494 aaKnown RBP20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 DEPDC7Q96QD5 511 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 SLC2A13Q96QE2 648 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 FAM204AQ9H8W3 233 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 DDIT4Q9NX09 232 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 VPS28Q9UK41 221 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 HS3ST2Q9Y278 367 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 TBC1D30Q9Y2I9 924 aa20.48■□□□□ 0.87
LPCAT3-211ENST00000543794 DOCK9Q9BZ29 2069 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 FFAR2O15552 330 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 LETM1O95202 739 aaPredicted RBP20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 GP1BAP07359 652 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 CTSLP07711 333 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 IRAK1P51617 712 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 UCNP55089 124 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 ERVPABLB-1P60509 514 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 RHDQ02161 417 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 MTA1Q13330 715 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 STIM1Q13586 685 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 C5orf22Q49AR2 442 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 TAF1BQ53T94 588 aaPredicted RBP20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 DEFB106AQ8N104 65 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 FAM181AQ8N9Y4 354 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 OR13H1Q8NG92 308 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 RNF34Q969K3 372 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 IFT43Q96FT9 208 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 APOLD1Q96LR9 279 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 MYOCQ99972 504 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 CAAP1Q9H8G2 361 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 VANGL2Q9ULK5 521 aa20.47■□□□□ 0.87
LPCAT3-211ENST00000543794 BNIP3LO60238 219 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 USP12O75317 370 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 CLDN11O75508 207 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 MT-CO1P00395 513 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 ALPPL2P10696 532 aa20.46■□□□□ 0.87
LPCAT3-211ENST00000543794 SRCP12931 536 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms