RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 DUSP6Q16828 381 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 TTLL9Q3SXZ7 439 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 PCID2Q5JVF3 399 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 UMODL1-AS1Q8N2C9 162 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 DCAF4L2Q8NA75 395 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 SCAMP5Q8TAC9 235 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 CCT6BQ92526 530 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 SMARCD2Q92925 531 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 TRIM54Q9BYV2 358 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 CEP44Q9C0F1 390 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 CDH19Q9H159 772 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 PRDM12Q9H4Q4 367 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 GLOD4Q9HC38 313 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 SEC31AO94979 1220 aaKnown RBP8.14□□□□□ -1.11
TRIM59-208ENST00000543469 MAPK9P45984 424 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 IFI35P80217 286 aaPredicted RBP8.14□□□□□ -1.11
TRIM59-208ENST00000543469 ELP6Q0PNE2 266 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 GALNT2Q10471 571 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 ZNF284Q2VY69 593 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 FNDC3BQ53EP0 1204 aaKnown RBP8.14□□□□□ -1.11
TRIM59-208ENST00000543469 FASTKD1Q53R41 847 aaKnown RBP8.14□□□□□ -1.11
TRIM59-208ENST00000543469 CMTM8Q8IZV2 173 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 PCDH20Q8N6Y1 951 aaKnown RBP8.14□□□□□ -1.11
TRIM59-208ENST00000543469 CD207Q9UJ71 328 aa8.14□□□□□ -1.11
TRIM59-208ENST00000543469 SPATS2Q86XZ4 545 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 CCDC185Q8N715 623 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 TUBGCP5Q96RT8 1024 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 TMEM121Q9BTD3 319 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 CORO1CQ9ULV4 474 aaPredicted RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 PLAAQ9Y263 795 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 MAN2B1O00754 1011 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 TSPAN3O60637 253 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 ATG13O75143 517 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 SRPRAP08240 638 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 RBL1P28749 1068 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 WEE1P30291 646 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 RGS4P49798 205 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 MGAT5Q09328 741 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 ATG16L1Q676U5 607 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 DUPD1Q68J44 220 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 TTC23LQ6PF05 361 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 RBM23Q86U06 439 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 DNAAF5Q86Y56 855 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 SLC35B2Q8TB61 432 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 USP33Q8TEY7 942 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 ART4Q93070 314 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 TRMT61BQ9BVS5 477 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 PIGVQ9NUD9 493 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 AGO1Q9UL18 857 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 FAM92AA1XBS5 289 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 POC1B-GALNT4F8VUJ3 575 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 LEFTY2O00292 366 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 POP4O95707 220 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 TROVE2P10155 538 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 SERPINH1P50454 418 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 LRRC8EQ6NSJ5 796 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 HTR3DQ70Z44 454 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 LRRTM3Q86VH5 581 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 PDCD6IPQ8WUM4 868 aaKnown RBP8.13□□□□□ -1.11
TRIM59-208ENST00000543469 FICDQ9BVA6 458 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 CIPCQ9C0C6 399 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 CLDND1Q9NY35 253 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 CDH7Q9ULB5 785 aa8.13□□□□□ -1.11
TRIM59-208ENST00000543469 SMIM23A6NLE4 172 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 COCHO43405 550 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 KDELR3O43731 214 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 H2AFYO75367 372 aaKnown RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 NDUFS3O75489 264 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 ADH5P11766 374 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 VCLP18206 1134 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 ADRA1DP25100 572 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 DGKGP49619 791 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PRKAA2P54646 552 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PTPN5P54829 565 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 SYPL2Q5VXT5 272 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 LRRC8BQ6P9F7 803 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 TFAP2DQ7Z6R9 452 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PHC3Q8NDX5 983 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 AGAP3Q96P47 875 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 FCRL5Q96RD9 977 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 A0A1W2PRU2 124 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 KPNA5O15131 536 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 CRCPO75575 148 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 SNRPAP09012 282 aaKnown RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 ACADMP11310 421 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 TCF3P15923 654 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 RAPH1Q70E73 1250 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 CCDC110Q8TBZ0 833 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 FEM1CQ96JP0 617 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 TMEM209Q96SK2 561 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 TMLHEQ9NVH6 421 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 APPL1Q9UKG1 709 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 HS3ST4Q9Y661 456 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PDE2AO00408 941 aaPredicted RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 PER2O15055 1255 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 MSI1O43347 362 aaKnown RBP8.12□□□□□ -1.11
TRIM59-208ENST00000543469 RNF40O75150 1001 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 GSRP00390 522 aa8.12□□□□□ -1.11
TRIM59-208ENST00000543469 KCNJ1P48048 391 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms