RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PARP4Q9UKK3 1724 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 ATRNL1Q5VV63 1379 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 KRT87PA6NCN2 255 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM47E-STBD1D6RA91 191 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 ARVCFO00192 962 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 AIM2O14862 343 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 RASGRP1O95267 797 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 EOMESO95936 686 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 RARAP10276 462 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PGM1P36871 562 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 GNALP38405 381 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 GPR1P46091 355 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SERPINH1P50454 418 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MRPS5P82675 430 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 GALNTL6Q49A17 601 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 AASDHQ4L235 1098 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 RAET1GQ6H3X3 334 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 KCNMB4Q86W47 210 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FBXO25Q8TCJ0 367 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 OR8D1Q8WZ84 308 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM162AQ96A26 154 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CEP19Q96LK0 163 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 KCNK16Q96T55 309 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PAFAH2Q99487 392 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CDC6Q99741 560 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 ECSITQ9BQ95 431 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 DHX33Q9H6R0 707 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FAF1Q9UNN5 650 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MAFBQ9Y5Q3 323 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MYO1GB0I1T2 1018 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 NEDD8-MDP1E9PL57 170 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 EIF3HO15372 352 aaKnown RBP eCLIP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 ZBTB14O43829 449 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 TSPAN1O60635 241 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MDH1P40925 334 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CCNG1P51959 295 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SULT2A1Q06520 285 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FXNQ16595 210 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PDPK2PQ6A1A2 396 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SHC3Q92529 594 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SCOCQ9UIL1 159 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PCDHA3Q9Y5H8 950 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SNX13Q9Y5W8 968 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SIGLEC1Q9BZZ2 1709 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CASZ1Q86V15 1759 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SYN3O14994 580 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SCAMP1O15126 338 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CCNT2O60583 730 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 BMP10O95393 424 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 OR4Q2P0C623 313 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 HOXB8P17481 243 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SYN1P17600 705 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 GP5P40197 560 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 TUBA1BP68363 451 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FUT2Q10981 343 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CEP78Q5JTW2 689 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 RARS2Q5T160 578 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CCSAPQ6IQ19 270 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 TUBA1AQ71U36 451 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PEX5LQ8IYB4 626 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 NAT16Q8N8M0 369 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 DACH2Q96NX9 599 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 THUMPD3Q9BV44 507 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D4O60343 1298 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 KDELR1P24390 212 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MGAT1P26572 445 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SOX11P35716 441 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MATKP42679 507 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MAP3K10Q02779 954 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 TUBA3CQ13748 450 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 DNAL1Q4LDG9 190 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 C16orf89Q6UX73 402 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 LRRC55Q6ZSA7 311 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM71AQ8IYT1 594 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 CXorf40BQ96DE9 158 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MRPL45Q9BRJ2 306 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 SNRNP25Q9BV90 132 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 RMND5AQ9H871 391 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 IL1RL2Q9HB29 575 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 ACP6Q9NPH0 428 aa7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 MTO1Q9Y2Z2 717 aaKnown RBP7.01□□□□□ -1.29
SRGAP1-206ENST00000543397 PLIN4Q96Q06 1357 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 H3BMM5 538 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 USP12O75317 370 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TYMPP19971 482 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 RBL1P28749 1068 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 COL19A1Q14993 1142 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 BMT2Q1RMZ1 405 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 BRMS1LQ5PSV4 323 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 HYIQ5T013 277 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 HLA-DQA1Q5Y7H0 255 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CAPRIN2Q6IMN6 1127 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 NEK5Q6P3R8 708 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 LAYNQ6UX15 382 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 NEK10Q6ZWH5 1172 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 SLC22A9Q8IVM8 553 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 KRT78Q8N1N4 520 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 C10orf53Q8N6V4 93 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms