RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 TMEM9BQ9NQ34 198 aa10.67□□□□□ -0.7
RFC5-209ENST00000543153 C19orf73Q9NVV2 129 aa10.67□□□□□ -0.7
RFC5-209ENST00000543153 MTMR6Q9Y217 621 aa10.67□□□□□ -0.7
RFC5-209ENST00000543153 PLAAQ9Y263 795 aa10.67□□□□□ -0.7
RFC5-209ENST00000543153 SH3BP1Q9Y3L3 701 aa10.67□□□□□ -0.7
RFC5-209ENST00000543153 A0A1W2PQJ5 194 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 TCRBV21S2A2A0A5A6 115 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 LNP1A1A4G5 178 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 K7EQS6 105 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 CLDN5O00501 218 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 TACC1O75410 805 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 RTN3O95197 1032 aaPredicted RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 KAT7O95251 611 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 IRF1P10914 325 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 TRIM21P19474 475 aaKnown RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 PMLP29590 882 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 MYL6P60660 151 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 SLC7A9P82251 487 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 DHCR24Q15392 516 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 CRY1Q16526 586 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 ANO4Q32M45 955 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 ZNF699Q32M78 642 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 TRIM61Q5EBN2 209 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 EOGTQ5NDL2 527 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 LPCAT2Q7L5N7 544 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 NUP93Q8N1F7 819 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 TXNDC5Q8NBS9 432 aaKnown RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■■■■□ 22.4
RFC5-209ENST00000543153 INTS4Q96HW7 963 aaKnown RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 TNIP3Q96KP6 325 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 LSM14BQ9BX40 385 aaKnown RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 RNF38Q9H0F5 515 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 BLZF1Q9H2G9 400 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 DMAP1Q9NPF5 467 aaPredicted RBP10.66□□□□□ -0.7
RFC5-209ENST00000543153 TBC1D14Q9P2M4 693 aa10.66□□□□□ -0.7
RFC5-209ENST00000543153 ATXN2Q99700 1313 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 TBC1D3BA6NDS4 549 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 PATE3B3GLJ2 98 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 POLR2DO15514 142 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 CUTAO60888 179 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 PPP6R2O75170 966 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 OAS1P00973 400 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 P4HA1P13674 534 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 BCKDHBP21953 392 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 ATICP31939 592 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 SLC6A11P48066 632 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 ME1P48163 572 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 ATXN3P54252 364 aaPredicted RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 CACNA2D1P54289 1103 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 ZXDBP98169 803 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 PREPLQ4J6C6 727 aaPredicted RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 ZNF667Q5HYK9 610 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 UNC13DQ70J99 1090 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 LIMS2Q7Z4I7 341 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 MTDHQ86UE4 582 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 NUP43Q8NFH3 380 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 RLN3Q8WXF3 142 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 SMARCD1Q96GM5 515 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 MAGEB10Q96LZ2 347 aaPredicted RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 NUSAP1Q9BXS6 441 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 SMYD3Q9H7B4 428 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 MAGEF1Q9HAY2 307 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 SLC39A2Q9NP94 309 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 ZDHHC4Q9NPG8 344 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 GPR160Q9UJ42 338 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 TRAF6Q9Y4K3 522 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 OAS3Q9Y6K5 1087 aaKnown RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 MORC2Q9Y6X9 1032 aaPredicted RBP10.65□□□□□ -0.7
RFC5-209ENST00000543153 OBSL1O75147 1896 aa10.65□□□□□ -0.7
RFC5-209ENST00000543153 SDK1Q7Z5N4 2213 aa10.65□□□□□ -0.71
RFC5-209ENST00000543153 ZNF638Q14966 1978 aaKnown RBP10.65□□□□□ -0.71
RFC5-209ENST00000543153 MAP1BP46821 2468 aaKnown RBP10.64□□□□□ -0.71
RFC5-209ENST00000543153 RALGAPA1Q6GYQ0 2036 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 SGK1O00141 431 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 BIN1O00499 593 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 TGFB1I1O43294 461 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 COCHO43405 550 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 YEATS4O95619 227 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 CFIP05156 583 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 LCP1P13796 627 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 CASP1P29466 404 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 HOXD13P35453 343 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 EIF2DP41214 584 aaKnown RBP10.64□□□□□ -0.71
RFC5-209ENST00000543153 CASP4P49662 377 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 SLC5A3P53794 718 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 SNRPFP62306 86 aaKnown RBP10.64□□□□□ -0.71
RFC5-209ENST00000543153 GAD2Q05329 585 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 GOLGA8FQ08AF8 430 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 GOLGA8DPQ0D2H9 430 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 LMAN2Q12907 356 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 LSAMPQ13449 338 aa10.64□□□□□ -0.71
RFC5-209ENST00000543153 LY6G5CQ5SRR4 150 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms