RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 BRMS1LQ5PSV4 323 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ARMC3Q5W041 872 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 SDE2Q6IQ49 451 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 GDF6Q6KF10 455 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 FSTL4Q6MZW2 842 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NET1Q7Z628 596 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 STRA8Q7Z7C7 330 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 METTL23Q86XA0 190 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 RASAL3Q86YV0 1011 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 RBM15BQ8NDT2 890 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 STON2Q8WXE9 905 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NAF1Q96HR8 494 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 SCYL1Q96KG9 808 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 UROC1Q96N76 676 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 RILPQ96NA2 401 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 AGAP3Q96P47 875 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 EBF4Q9BQW3 602 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 STX18Q9P2W9 335 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PCDHB12Q9Y5F1 795 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TIMM13Q9Y5L4 95 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ARHGEF37A1IGU5 675 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CASTOR2A6NHX0 329 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 FGF10O15520 208 aaPredicted RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 USP12O75317 370 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 LYPLA1O75608 230 aaPredicted RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 APOA4P06727 396 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 ATP6V1C1P21283 382 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CCNCP24863 283 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 VHLP40337 213 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 RABGGTBP53611 331 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 PRKAA2P54646 552 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 ALDH18A1P54886 795 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 GRIK3Q13003 919 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 MPP3Q13368 585 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 OLIG2Q13516 323 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 MAPRE1Q15691 268 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 TSNAXIP1Q2TAA8 658 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 PPM1JQ5JR12 505 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 PDPK2PQ6A1A2 396 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CES3Q6UWW8 571 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CMC1Q7Z7K0 106 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 KCNMB4Q86W47 210 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 RDH11Q8TC12 318 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 GLMNQ92990 594 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 STMN2Q93045 179 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 LPPQ93052 612 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 HAPLN3Q96S86 360 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 KIFC1Q9BW19 673 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 APOBEC2Q9Y235 224 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 ANKRD6Q9Y2G4 727 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 AAR2Q9Y312 384 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 A0A096LPK6 155 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 TMEM88BA6NKF7 163 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 PRR5-ARHGAP8B1AHC4 643 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 TDRD15B5MCY1 1934 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 H0Y3Z8 333 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF195O14628 629 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 GPR37O15354 613 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 IRAK2O43187 625 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 SRGAP2BP0DMP2 458 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 BDNFP23560 247 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 HK2P52789 917 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 ARHGAP8P85298 464 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 SLC34A1Q06495 639 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 RCN2Q14257 317 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 RCN1Q15293 331 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CERCAMQ5T4B2 595 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 C6orf163Q5TEZ5 329 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 MANEALQ5VSG8 457 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 MAVSQ7Z434 540 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CTU1Q7Z7A3 348 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CNTN4Q8IWV2 1026 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 SCUBE1Q8IWY4 988 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 URGCPQ8TCY9 931 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 PTCD2Q8WV60 388 aaKnown RBP6.67□□□□□ -1.34
PTPRO-208ENST00000542557 WDR60Q8WVS4 1066 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 EDEM1Q92611 657 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 MFSD3Q96ES6 412 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 FCRL5Q96RD9 977 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 GPR22Q99680 433 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 IL1RAPL1Q9NZN1 696 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF212Q9UDV6 495 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 DNAJB4Q9UDY4 337 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 CDY1Q9Y6F8 540 aa6.67□□□□□ -1.34
PTPRO-208ENST00000542557 TNPO2O14787 897 aaKnown RBP6.66□□□□□ -1.34
PTPRO-208ENST00000542557 INPPL1O15357 1258 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 SIN3BO75182 1162 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CIB2O75838 187 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 KRT36O76013 467 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CTSHP09668 335 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CYBAP13498 195 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 TYMPP19971 482 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 ARRB2P32121 409 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CPOXP36551 454 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 CPA2P48052 419 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 POLD2P49005 469 aa6.66□□□□□ -1.34
PTPRO-208ENST00000542557 IDH3AP50213 366 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms