RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 CELSR3Q9NYQ7 3312 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.41■□□□□ 0.86
DDX11-220ENST00000542244 A0A0D9SEW6 157 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
DDX11-220ENST00000542244 CYP11B1P15538 503 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 FLT3P36888 993 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 KLK7P49862 253 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 SULT1E1P49888 294 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 NXPH1P58417 271 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 ZNF177Q13360 481 aaPredicted RBP20.41■□□□□ 0.86
DDX11-220ENST00000542244 RAPGEF1Q13905 1077 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 KLHDC7AQ5VTJ3 777 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 TTC39BQ5VTQ0 682 aaPredicted RBP20.41■□□□□ 0.86
DDX11-220ENST00000542244 LRSAM1Q6UWE0 723 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 LINGO4Q6UY18 593 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 NOP9Q86U38 636 aaKnown RBP20.41■□□□□ 0.86
DDX11-220ENST00000542244 XYLT1Q86Y38 959 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 SH2D3CQ8N5H7 860 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 CHST14Q8NCH0 376 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 PIP4K2CQ8TBX8 421 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 KLK6Q92876 244 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 NT5C3BQ969T7 300 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 NAA15Q9BXJ9 866 aaKnown RBP20.41■□□□□ 0.86
DDX11-220ENST00000542244 SYNCQ9H7C4 482 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.41■□□□□ 0.86
DDX11-220ENST00000542244 RAXQ9Y2V3 346 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 GPSM3Q9Y4H4 160 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 ACTL7AQ9Y615 435 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 FAM208BQ5VWN6 2430 aa20.41■□□□□ 0.86
DDX11-220ENST00000542244 PLRG1O43660 514 aaKnown RBP20.4■□□□□ 0.86
DDX11-220ENST00000542244 RRM1P23921 792 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 CDH5P33151 784 aaPredicted RBP20.4■□□□□ 0.86
DDX11-220ENST00000542244 SULT2A1Q06520 285 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 TPD52L1Q16890 204 aaPredicted RBP20.4■□□□□ 0.86
DDX11-220ENST00000542244 TFAP2DQ7Z6R9 452 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 PHLDB2Q86SQ0 1253 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 EID2Q8N6I1 236 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 OR8D1Q8WZ84 308 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 ARRDC3Q96B67 414 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 MAGEB5Q9BZ81 275 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 CCDC86Q9H6F5 360 aaKnown RBP20.4■□□□□ 0.86
DDX11-220ENST00000542244 VPS51Q9UID3 782 aa20.4■□□□□ 0.86
DDX11-220ENST00000542244 ITPR1Q14643 2758 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 TRABD2BA6NFA1 517 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 GOLGA8SH3BPF8 625 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 TLR4O00206 839 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 MCF2LO15068 1137 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 MMEP08473 750 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 NNMTP40261 264 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 GABRB2P47870 512 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 VASPP50552 380 aaPredicted RBP20.39■□□□□ 0.85
DDX11-220ENST00000542244 CDH4P55283 916 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 KANSL1Q7Z3B3 1105 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 OR7D4Q8NG98 312 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 SLC20A1Q8WUM9 679 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 NOX5Q96PH1 765 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 MYOCQ99972 504 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 MUC3BQ9H195 1237 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 WDCPQ9H6R7 721 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 ZNF212Q9UDV6 495 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 FTSJ1Q9UET6 329 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 SLC25A13Q9UJS0 675 aa20.39■□□□□ 0.85
DDX11-220ENST00000542244 DRGXA6NNA5 263 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 CLDN11O75508 207 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 ENDOD1O94919 500 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 GJB6O95452 261 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 EPHA8P29322 1005 aaPredicted RBP20.38■□□□□ 0.85
DDX11-220ENST00000542244 DEUP1Q05D60 604 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 CYP4F3Q08477 520 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 SMAD1Q15797 465 aaKnown RBP20.38■□□□□ 0.85
DDX11-220ENST00000542244 FAM102AQ5T9C2 384 aaPredicted RBP20.38■□□□□ 0.85
DDX11-220ENST00000542244 PIP5KL1Q5T9C9 394 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 NAPEPLDQ6IQ20 393 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 TMEM35BQ8NCS4 154 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 OR2A12Q8NGT7 310 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 CPA5Q8WXQ8 436 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 CFAP57Q96MR6 1250 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 TNKS2Q9H2K2 1166 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 TAB2Q9NYJ8 693 aa20.38■□□□□ 0.85
DDX11-220ENST00000542244 CACNA1GO43497 2377 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 ENC1O14682 589 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 ZNF821O75541 412 aaPredicted RBP20.37■□□□□ 0.85
DDX11-220ENST00000542244 ITGAVP06756 1048 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 RHOCP08134 193 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 PRLRP16471 622 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 SFSWAPQ12872 951 aaKnown RBP20.37■□□□□ 0.85
DDX11-220ENST00000542244 COL28A1Q2UY09 1125 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 BNIPLQ7Z465 357 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 EMC1Q8N766 993 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 C18orf8Q96DM3 657 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 PGAP3Q96FM1 320 aaPredicted RBP20.37■□□□□ 0.85
DDX11-220ENST00000542244 CNDP2Q96KP4 475 aaKnown RBP20.37■□□□□ 0.85
DDX11-220ENST00000542244 FZD3Q9NPG1 666 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 GDF3Q9NR23 364 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 TMEM59LQ9UK28 342 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 HS3ST2Q9Y278 367 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 NBEAQ8NFP9 2946 aa20.37■□□□□ 0.85
DDX11-220ENST00000542244 ANKRD11Q6UB99 2663 aaPredicted RBP20.37■□□□□ 0.85
DDX11-220ENST00000542244 ADAMTS20P59510 1910 aa20.36■□□□□ 0.85
DDX11-220ENST00000542244 EPHB6O15197 1021 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms