RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 BRSK1Q8TDC3 778 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 HCAR2Q8TDS4 363 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 SENP8Q96LD8 212 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 APBA2Q99767 749 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 KCTD14Q9BQ13 255 aaPredicted RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 KLQ9UEF7 1012 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 PPP2R3BQ9Y5P8 575 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 PVALEFA0A1B0GWK0 134 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 ZNF839A8K0R7 811 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 MICAL2O94851 1124 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 CSTF2P33240 577 aaKnown RBP eCLIP6.41□□□□□ -1.38
DMD-228ENST00000541735 CD86P42081 329 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 NPTX2P47972 431 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 CHAF1BQ13112 559 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 MTA1Q13330 715 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 MADCAM1Q13477 382 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 BNC2Q6ZN30 1099 aaPredicted RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 ATG9AQ7Z3C6 839 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 FAM9CQ8IZT9 166 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 PARP8Q8N3A8 854 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 TINF2Q9BSI4 451 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 MCMBPQ9BTE3 642 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 SLC12A4Q9UP95 1085 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 PCDHB3Q9Y5E6 796 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 PEX10O60683 326 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 FAM20BO75063 409 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 DEAF1O75398 565 aaPredicted RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 ATG7O95352 703 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 LYNP07948 512 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 TALDO1P37837 337 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 MRPS6P82932 125 aaKnown RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 BST2Q10589 180 aaKnown RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 ECH1Q13011 328 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 VITQ6UXI7 678 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 FAM151BQ6UXP7 276 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 BOLLQ8N9W6 283 aaKnown RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 AUTS2Q8WXX7 1259 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 SIKE1Q9BRV8 207 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 MTA3Q9BTC8 594 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 TMEM121Q9BTD3 319 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 MID1IP1Q9NPA3 183 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 SEMA4BQ9NPR2 832 aaPredicted RBP6.41□□□□□ -1.38
DMD-228ENST00000541735 NUP50Q9UKX7 468 aa6.41□□□□□ -1.38
DMD-228ENST00000541735 PDXKO00764 312 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 SLC37A4O43826 429 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 CALCAP01258 141 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 STATHP02808 62 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 UBTFL6P0CB48 400 aaPredicted RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 VDRP11473 427 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 RPL17P18621 184 aaKnown RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 PPP2R2AP63151 447 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 ITGA7Q13683 1181 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 FAM91A1Q658Y4 838 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 NYAP1Q6ZVC0 841 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 UBE2R2Q712K3 238 aaPredicted RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 ZNF366Q8N895 744 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 LRRC39Q96DD0 335 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 ZBTB45Q96K62 511 aaPredicted RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 PDCD10Q9BUL8 212 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 ZFP14Q9HCL3 533 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 PSMC3IPQ9P2W1 217 aaPredicted RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 DEC1Q9P2X7 70 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 SPEF1Q9Y4P9 236 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 MICAL3Q7RTP6 2002 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 A0A1B0GW55 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 CFAP73A6NFT4 308 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 BIRC5O15392 142 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 KRT16P08779 473 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 SNRPAP09012 282 aaKnown RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4L2P0CJ85 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4L3P0CJ86 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4L4P0CJ87 422 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4L5P0CJ88 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4L6P0CJ89 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4L7P0CJ90 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 NR2F1P10589 423 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 ERCC2P18074 760 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 GDI1P31150 447 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 RYKP34925 604 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 HPCAL1P37235 193 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 CASRP41180 1078 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 CASP6P55212 293 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 ARF3P61204 181 aaPredicted RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 ARF1P84077 181 aaKnown RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 CHRNB3Q05901 458 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 PKN1Q16512 942 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 PGBD2Q6P3X8 592 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 TDRD5Q8NAT2 981 aaKnown RBP6.4□□□□□ -1.38
DMD-228ENST00000541735 TIPINQ9BVW5 301 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 ENAMQ9NRM1 1142 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 DUX4Q9UBX2 424 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 CDC42BPGQ6DT37 1551 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 NCAPD2Q15021 1401 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 SSH2Q76I76 1423 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 A0A087X0B3 334 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 H3BM21 787 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 CES2O00748 559 aa6.4□□□□□ -1.38
DMD-228ENST00000541735 AREL1O15033 823 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms