RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CTIFO43310 598 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TULP3O75386 442 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TSPAN9O75954 239 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PDE8BO95263 885 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CCNDBP1O95273 360 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PRR35P0CG20 571 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CYP2D6P10635 497 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CREB1P16220 341 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 RRM1P23921 792 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ARL1P40616 181 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PNPLA4P41247 253 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF81P51508 661 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 RCAN1P53805 252 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 RARSP54136 660 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TXNL4AP83876 142 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TDGQ13569 410 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CUL4AQ13619 759 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 MEA1Q16626 185 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CYP1B1Q16678 543 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 MTX3Q5HYI7 312 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CBWD5Q5RIA9 395 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 DENND1BQ6P3S1 775 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PIK3AP1Q6ZUJ8 805 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ADGRG6Q86SQ4 1221 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CHSY1Q86X52 802 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 RPAP2Q8IXW5 612 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 NGEFQ8N5V2 710 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 SIRT6Q8N6T7 355 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PTGR2Q8N8N7 351 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TERB1Q8NA31 727 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PNLDC1Q8NA58 520 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ZMIZ2Q8NF64 920 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ETNPPLQ8TBG4 499 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ADAMTS18Q8TE60 1221 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 SMG7Q92540 1137 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 SH3KBP1Q96B97 665 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 ASB2Q96Q27 587 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PAAF1Q9BRP4 392 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CINPQ9BW66 212 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 INTS2Q9H0H0 1204 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TAOK3Q9H2K8 898 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 STN1Q9H668 368 aaKnown RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PRKRIP1Q9H875 184 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 PDE11AQ9HCR9 933 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 NKIRAS2Q9NYR9 191 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 TAS2R10Q9NYW0 307 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 AMFRQ9UKV5 643 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 SLC12A4Q9UP95 1085 aa4.57□□□□□ -1.68
SNHG1-217ENST00000541578 CEP170BQ9Y4F5 1589 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-217ENST00000541578 A2ML1A8K2U0 1454 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 FMN1Q68DA7 1419 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 TMEM232C9JQI7 657 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 H7C1Q1 480 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 PPP6CO00743 305 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 TUBB4AP04350 444 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 SPARCP09486 303 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 CSF1P09603 554 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 ALADP13716 330 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 KELP23276 732 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 NFKBIAP25963 317 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 MPGP29372 298 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 HTR7P34969 479 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 HARS2P49590 506 aaKnown RBP4.56□□□□□ -1.68
SNHG1-217ENST00000541578 NAA25Q14CX7 972 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 WTAPQ15007 396 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 AAK1Q2M2I8 961 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 CCDC96Q2M329 555 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 LRRC24Q50LG9 513 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 WDR93Q6P2C0 686 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 C16orf54Q6UWD8 224 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 KIRREL2Q6UWL6 708 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF66Q6ZN08 573 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 DPY19L3Q6ZPD9 716 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 METTL25Q8N6Q8 603 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 NFKBIDQ8NI38 313 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 ZCCHC10Q8TBK6 192 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 ARRDC3Q96B67 414 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 MCRS1Q96EZ8 462 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 RSRC1Q96IZ7 334 aaKnown RBP4.56□□□□□ -1.68
SNHG1-217ENST00000541578 SNX18Q96RF0 628 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 PRR25Q96S07 402 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 AP1M1Q9BXS5 423 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 CIPCQ9C0C6 399 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 CLPBQ9H078 707 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 SLC25A18Q9H1K4 315 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 MROH8Q9H579 483 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 SNX15Q9NRS6 342 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 PPP1R14DQ9NXH3 145 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 RNF7Q9UBF6 113 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 DIP2CQ9Y2E4 1556 aa4.56□□□□□ -1.68
SNHG1-217ENST00000541578 FAM135BQ49AJ0 1406 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CDC42BPBQ9Y5S2 1711 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 CLTCQ00610 1675 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 ZNF804BA4D1E1 1349 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 DNMT1P26358 1616 aaKnown RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 KIF14Q15058 1648 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 C3orf70A6NLC5 250 aaPredicted RBP4.55□□□□□ -1.68
SNHG1-217ENST00000541578 A8MVJ9 347 aa4.55□□□□□ -1.68
SNHG1-217ENST00000541578 POC1B-GALNT4F8VUJ3 575 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms