RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 SIX2Q9NPC8 291 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 ANLNQ9NQW6 1124 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 SLC25A13Q9UJS0 675 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 TPX2Q9ULW0 747 aaKnown RBP16.69■□□□□ 0.26
TRIM65-203ENST00000540812 CA5BQ9Y2D0 317 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 SNX10Q9Y5X0 201 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 DOCK9Q9BZ29 2069 aa16.69■□□□□ 0.26
TRIM65-203ENST00000540812 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-203ENST00000540812 I6L893 689 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-203ENST00000540812 MCF2LO15068 1137 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 SLC7A4O43246 635 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 BNIP3LO60238 219 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 RFPL3O75679 317 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 ADCY5O95622 1261 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 MT-CO1P00395 513 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 CTSLP07711 333 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 TFE3P19532 575 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-203ENST00000540812 ARRB1P49407 418 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-203ENST00000540812 SLC6A3Q01959 620 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 ZNF177Q13360 481 aaPredicted RBP16.68■□□□□ 0.26
TRIM65-203ENST00000540812 ACAP1Q15027 740 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 C5orf22Q49AR2 442 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 SFMBT2Q5VUG0 894 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 FAM46CQ5VWP2 391 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 CLEC17AQ6ZS10 378 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 DSG4Q86SJ6 1040 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 SLC47A2Q86VL8 602 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 SH2D3CQ8N5H7 860 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 TSC1Q92574 1164 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 PSMB7Q99436 277 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 SIK2Q9H0K1 926 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 KDM4CQ9H3R0 1056 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 PIGVQ9NUD9 493 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 VPS28Q9UK41 221 aa16.68■□□□□ 0.26
TRIM65-203ENST00000540812 C1QTNF3-AMACRE9PGA6 284 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 M0QYT0 321 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
TRIM65-203ENST00000540812 SNAP91O60641 907 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 CLDN11O75508 207 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 JUPP14923 745 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 NOS2P35228 1153 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 CLCN1P35523 988 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 TAS2R38P59533 333 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 PTK2Q05397 1052 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 CAMK4Q16566 473 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 ALFQ53S48 1182 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 SLC26A9Q7LBE3 791 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 ZNF683Q8IZ20 524 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 BBC3Q96PG8 261 aaPredicted RBP16.67■□□□□ 0.26
TRIM65-203ENST00000540812 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 MUC3BQ9H195 1237 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 KIAA1468Q9P260 1216 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 TBC1D30Q9Y2I9 924 aa16.67■□□□□ 0.26
TRIM65-203ENST00000540812 A0A087WV48 116 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 FAM170AA1A519 330 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 GTPBP10A4D1E9 387 aaKnown RBP16.66■□□□□ 0.26
TRIM65-203ENST00000540812 E9PAM4 449 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 K7ERQ8 282 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 RNF103O00237 685 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 ALOX15BO15296 676 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 SDC3O75056 442 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 C1SP09871 688 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 SRCP12931 536 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 ZNF18P17022 549 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 CDH4P55283 916 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 UBE2HP62256 183 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 TARDBPQ13148 414 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRIM65-203ENST00000540812 PIP5KL1Q5T9C9 394 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 HES3Q5TGS1 186 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 OXR1Q8N573 874 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 ZNF397Q8NF99 534 aaPredicted RBP16.66■□□□□ 0.26
TRIM65-203ENST00000540812 KLK6Q92876 244 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 ARRDC3Q96B67 414 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 DCBLD2Q96PD2 775 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 PPP1R9BQ96SB3 815 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 NPY6RQ99463 290 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 MYOCQ99972 504 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 TKTL2Q9H0I9 626 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 SYNCQ9H7C4 482 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 CAAP1Q9H8G2 361 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 ARHGEF38Q9NXL2 777 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 VPS51Q9UID3 782 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 DNAJC12Q9UKB3 198 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 HS3ST2Q9Y278 367 aa16.66■□□□□ 0.26
TRIM65-203ENST00000540812 RHOCP08134 193 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 PRLRP16471 622 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 RRM1P23921 792 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 KRT9P35527 623 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 NUDT1P36639 197 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 MTIF2P46199 727 aaKnown RBP16.65■□□□□ 0.26
TRIM65-203ENST00000540812 CXCR3P49682 368 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 RNASE9P60153 205 aaKnown RBP16.65■□□□□ 0.26
TRIM65-203ENST00000540812 MTA1Q13330 715 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 STAT4Q14765 748 aa16.65■□□□□ 0.26
TRIM65-203ENST00000540812 SETMARQ53H47 684 aaPredicted RBP16.65■□□□□ 0.26
TRIM65-203ENST00000540812 DPY19L2P1Q6NXN4 242 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms