RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 ARHGAP20Q9P2F6 1191 aa13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 PPARGC1AQ9UBK2 798 aaKnown RBP13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 LIMA1Q9UHB6 759 aaKnown RBP13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 SLC25A13Q9UJS0 675 aa13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 SARDHQ9UL12 918 aa13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 PCDHB9Q9Y5E1 797 aa13.46□□□□□ -0.25
SEMA4D-223ENST00000540475 EPHB6O15197 1021 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 PLRG1O43660 514 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 IL1BP01584 269 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 WNT1P04628 370 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 SRCP12931 536 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 UNGP13051 313 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 SOX5P35711 763 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 NUDT1P36639 197 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 GGCXP38435 758 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 ANP32AP39687 249 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 PSMD8P48556 350 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 KLK7P49862 253 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 CLCN6P51797 869 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 SUZ12Q15022 739 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 FAM46CQ5VWP2 391 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 TRIM72Q6ZMU5 477 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 SLCO6A1Q86UG4 719 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 GANCQ8TET4 914 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 OR8D1Q8WZ84 308 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 CENPIQ92674 756 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 CDC6Q99741 560 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 HSD3B7Q9H2F3 369 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 VPS28Q9UK41 221 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 ARID1BQ8NFD5 2236 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-223ENST00000540475 DSPP15924 2871 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 A0A1B0GTQ1 180 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ILVBLA1L0T0 632 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 E9PAM4 449 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 H0Y8X5 98 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 WNT9AO14904 365 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ZNF821O75541 412 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 GFPT2O94808 682 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 MT-CO1P00395 513 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ZNF18P17022 549 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 CD38P28907 300 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 METAP1P53582 386 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 POLR2FP61218 127 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 KRT83P78385 493 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 NCAPHQ15003 741 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 C2CD6Q53TS8 623 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 C6orf118Q5T5N4 469 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 AGBL4Q5VU57 503 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 LRRC31Q6UY01 552 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 TRIM69Q86WT6 500 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 CHCHD4Q8N4Q1 142 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 DCAF4L2Q8NA75 395 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 TMIEQ8NEW7 156 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 OR2A12Q8NGT7 310 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 OR14C36Q8NHC7 312 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 SETD7Q8WTS6 366 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 CFAP57Q96MR6 1250 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 SLC6A18Q96N87 628 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 C2orf49Q9BVC5 232 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ACE2Q9BYF1 805 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ERVMER34-1Q9H9K5 563 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 TMPRSS4Q9NRS4 437 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 ANO10Q9NW15 660 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 VPS51Q9UID3 782 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 APOBEC2Q9Y235 224 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 SNX10Q9Y5X0 201 aa13.44□□□□□ -0.26
SEMA4D-223ENST00000540475 A0A0D9SEW6 157 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 FAM47DPA6NHR8 397 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 C2CD4BA6NLJ0 364 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 CTSLP07711 333 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 RHOCP08134 193 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 STAT1P42224 750 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 GRK6P43250 576 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 PTPN9P43378 593 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 RXRGP48443 463 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 CCT8P50990 548 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 TAS2R38P59533 333 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 SHBQ15464 509 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 CCDC14Q49A88 953 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 ACCSLQ4AC99 568 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 FKBP15Q5T1M5 1219 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 MANEALQ5VSG8 457 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 NEK5Q6P3R8 708 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 LRSAM1Q6UWE0 723 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 LAYNQ6UX15 382 aa13.43□□□□□ -0.26
SEMA4D-223ENST00000540475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms