RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 SERPINB7O75635 380 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 ZNF12P17014 697 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 TFEBP19484 476 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 TRIM25Q14258 630 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 TGFBIQ15582 683 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 CERS2Q96G23 380 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 PIWIL1Q96J94 861 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 ZNF597Q96LX8 424 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 MRPL40Q9NQ50 206 aaKnown RBP13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 FAM49BQ9NUQ9 324 aa13.08□□□□□ -0.32
SFSWAP-209ENST00000540469 TK2O00142 265 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 SPTLC1O15269 473 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 KDM1AO60341 852 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 ASPAP45381 313 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 TMEM26Q6ZUK4 368 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 FAM183BPQ6ZVS7 135 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 DRC3Q9H069 523 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 HMGXB4Q9UGU5 601 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 SYNPO2Q9UMS6 1093 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 USP12O75317 370 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 ATE1O95260 518 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 ESRRBO95718 433 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 IFRD2Q12894 506 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 PRKAA1Q13131 559 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 RGS21Q2M5E4 152 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 RWDD4Q6NW29 188 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 DCDC5Q6ZRR9 648 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 CARM1Q86X55 608 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 RAVER1Q8IY67 606 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 ASB9Q96DX5 294 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 CNDP1Q96KN2 507 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 RANBP9Q96S59 729 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 CPNE1Q99829 537 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 ACE2Q9BYF1 805 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 TRPC7Q9HCX4 862 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 CCDC167Q9P0B6 97 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 STYXL1Q9Y6J8 313 aa13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-209ENST00000540469 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 E7ENX8 843 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 GOLGA8TH3BQL2 631 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 HSPA8P11142 646 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 AVPR1AP37288 418 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ACADVLP49748 655 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 NME3Q13232 169 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 DGKZQ13574 1117 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 PRPSAP1Q14558 356 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 FGD3Q5JSP0 725 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 GRTP1Q5TC63 336 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ELMSAN1Q6PJG2 1045 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 TNIP2Q8NFZ5 429 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 HTR3CQ8WXA8 447 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ACO2Q99798 780 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 MRPL4Q9BYD3 311 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ZNHIT2Q9UHR6 403 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 C2P06681 752 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 GRIA3P42263 894 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 CNTN2Q02246 1040 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 AGKQ53H12 422 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 SNX31Q8N9S9 440 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 RTP4Q96DX8 246 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 SGF29Q96ES7 293 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 MCRS1Q96EZ8 462 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 TWNKQ96RR1 684 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 LGMNQ99538 433 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 PORCNQ9H237 461 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 CNOT11Q9UKZ1 510 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 COPG1Q9Y678 874 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 SYNJ2BP-COX16A0A087WUM0 186 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 C2CD4BA6NLJ0 364 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 GCATO75600 419 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 BMP10O95393 424 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 CLIC3O95833 236 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 IDO1P14902 403 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 GNA12Q03113 381 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 AARS2Q5JTZ9 985 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 FSTL4Q6MZW2 842 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 CBR4Q8N4T8 237 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 LZTR1Q8N653 840 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 IL1RL2Q9HB29 575 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ZBTB26Q9HCK0 441 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 ZNF302Q9NR11 478 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 SLC38A7Q9NVC3 462 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 COX16Q9P0S2 106 aa13.06□□□□□ -0.32
SFSWAP-209ENST00000540469 OGTO15294 1046 aa13.05□□□□□ -0.32
SFSWAP-209ENST00000540469 PHGDHO43175 533 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-209ENST00000540469 H2AFYO75367 372 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-209ENST00000540469 ITGBL1O95965 494 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms