RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CDC16Q13042 620 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 USP10Q14694 798 aaKnown RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 TRIP10Q15642 601 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 SV2CQ496J9 727 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ARCQ7LC44 396 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 NT5DC4Q86YG4 428 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ZMIZ2Q8NF64 920 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 TMEM209Q96SK2 561 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 GATA5Q9BWX5 397 aaPredicted RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 NDFIP2Q9NV92 336 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 SFMBT1Q9UHJ3 866 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ADAMTS6Q9UKP5 1117 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 MTF2Q9Y483 593 aaPredicted RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ZCWPW2A0A1B0GU75 182 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 AURKAO14965 403 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 DCLK1O15075 740 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ETS2P15036 469 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 MX2P20592 715 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 BRCC3P46736 316 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 MRPS35P82673 323 aaKnown RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 DNAL1Q4LDG9 190 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 SDHAF4Q5VUM1 108 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 STEAP4Q687X5 459 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 PSTKQ8IV42 348 aaKnown RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF419Q96HQ0 510 aaPredicted RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 RBBP8Q99708 897 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ABHD16BQ9H3Z7 469 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 LRRC40Q9H9A6 602 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 NMRAL1Q9HBL8 299 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 WDR6Q9NNW5 1121 aaKnown RBP13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 ANKRD12Q6UB98 2062 aa13.93□□□□□ -0.18
BNIP3-202ENST00000540159 GNAT1P11488 350 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 ENO3P13929 434 aaPredicted RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 GARSP41250 739 aaKnown RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 RAP1GDS1P52306 607 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 DPYSQ14117 519 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 SFT2D3Q587I9 215 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 NDNQ99608 321 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 CDH22Q9UJ99 828 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 NRCAMQ92823 1304 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 MAGEC1O60732 1142 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 DAB1O75553 588 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 RAG1P15918 1043 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 ITGAXP20702 1163 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 SPRP35270 261 aaPredicted RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 AQP4P55087 323 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 TRMT5Q32P41 509 aaKnown RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 NET1Q7Z628 596 aaPredicted RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 FAM35AQ86V20 835 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 SNX32Q86XE0 403 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF354CQ86Y25 554 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 TSC22D3Q99576 134 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 MPP6Q9NZW5 540 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 RUVBL2Q9Y230 463 aaKnown RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 TLL2Q9Y6L7 1015 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 RNASEH1O60930 286 aaKnown RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 PIGNO95427 931 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 HDCP19113 662 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 DSG1Q02413 1049 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 HNRNPABQ99729 332 aaKnown RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 MMADHCQ9H3L0 296 aaPredicted RBP13.92□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF212Q9UDV6 495 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
BNIP3-202ENST00000540159 MYOCOSA0A1B0GUC4 107 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 G3V2L1 256 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 AP2A1O95782 977 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 OR4Q2P0C623 313 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 GRIA4P48058 902 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 GLUD2P49448 558 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 DAOAP59103 153 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 CCNIQ14094 377 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 ESRP1Q6NXG1 681 aaKnown RBP13.91□□□□□ -0.18
BNIP3-202ENST00000540159 MYLK4Q86YV6 388 aaPredicted RBP13.91□□□□□ -0.18
BNIP3-202ENST00000540159 CNTD1Q8N815 330 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 CPNE1Q99829 537 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 ECSITQ9BQ95 431 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 POMPQ9Y244 141 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 HACD1B0YJ81 288 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 ZNF195O14628 629 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 B3GAT3O94766 335 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 AOC1P19801 751 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 LIMK2P53671 638 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 MAXP61244 160 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 ARL13AQ5H913 290 aaPredicted RBP13.91□□□□□ -0.18
BNIP3-202ENST00000540159 TIFABQ6ZNK6 161 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 SDCCAG8Q86SQ7 713 aaPredicted RBP13.91□□□□□ -0.18
BNIP3-202ENST00000540159 TMA16Q96EY4 203 aaKnown RBP13.91□□□□□ -0.18
BNIP3-202ENST00000540159 GCNAQ96QF7 691 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 PTPN18Q99952 460 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 ACE2Q9BYF1 805 aaPredicted RBP13.91□□□□□ -0.18
BNIP3-202ENST00000540159 TLK1Q9UKI8 766 aa13.91□□□□□ -0.18
BNIP3-202ENST00000540159 COL1A2P08123 1366 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms