RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
PRPF19-204ENST00000539960 HS3ST2Q9Y278 367 aa13.75□□□□□ -0.21
PRPF19-204ENST00000539960 EDDM13A0A1B0GTR0 161 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 SIN3BO75182 1162 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 GOT1P17174 413 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 ERCC2P18074 760 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 GLDCP23378 1020 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 MAN1A1P33908 653 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 TAS2R40P59535 323 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 KIAA1324Q6UXG2 1013 aaKnown RBP13.74□□□□□ -0.21
PRPF19-204ENST00000539960 PRR23BQ6ZRT6 265 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 ASCL5Q7RTU5 278 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 POLNQ7Z5Q5 900 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 TMEM139Q8IV31 216 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 SH2D3CQ8N5H7 860 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 FRMD1Q8N878 549 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 ATP11CQ8NB49 1132 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 PRCCQ92733 491 aaPredicted RBP13.74□□□□□ -0.21
PRPF19-204ENST00000539960 PTPRN2Q92932 1015 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRPF19-204ENST00000539960 RAB23Q9ULC3 237 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
PRPF19-204ENST00000539960 CXorf51AA0A1B0GTR3 108 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 PRR23AA6NEV1 266 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 TMEM110-MUSTN1A8MSY1 372 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 RASA4BC9J798 803 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 H3BRJ5 948 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 K7ERQ8 282 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 RASA4O43374 803 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 KDELR3O43731 214 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 IPO7O95373 1038 aaKnown RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 SRCP12931 536 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 VAV1P15498 845 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 ARL4AP40617 200 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 NOP2P46087 812 aaKnown RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 NDST2P52849 883 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 GSDMDP57764 484 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 RPS14P62263 151 aaKnown RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 DPYSQ14117 519 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 PLK5Q496M5 336 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 LINGO4Q6UY18 593 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 KBTBD6Q86V97 674 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 C11orf74Q86VG3 221 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 FAM71BQ8TC56 605 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 FAM129BQ96TA1 746 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 KLC2Q9H0B6 622 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 RSPH9Q9H1X1 276 aaPredicted RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 LRRC19Q9H756 370 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 GRPEL1Q9HAV7 217 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 PCDH18Q9HCL0 1135 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 TFR2Q9UP52 801 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 REXO2Q9Y3B8 237 aaKnown RBP13.73□□□□□ -0.21
PRPF19-204ENST00000539960 VPS13AQ96RL7 3174 aa13.73□□□□□ -0.21
PRPF19-204ENST00000539960 A0A0A6YYK5 440 aaPredicted RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 GOLGA6L3A6NEY3 463 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 MAP3K13O43283 966 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 SMAD6O43541 496 aaKnown RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 CD160O95971 181 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 KRT7P08729 469 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 ACADMP11310 421 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 BCKDHBP21953 392 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 AMPD1P23109 780 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 IL4RP24394 825 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 SLC1A1P43005 524 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 MRE11P49959 708 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 TPMTP51580 245 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 ARSEP51690 589 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 CLCN6P51797 869 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 CDH6P55285 790 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 ARF5P84085 180 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 ZBTB16Q05516 673 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 SERINC3Q13530 473 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 LPAL2Q16609 132 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 PARP15Q460N3 678 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 ZNF776Q68DI1 518 aaPredicted RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 LAIR1Q6GTX8 287 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 STK40Q8N2I9 435 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 LZTR1Q8N653 840 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 KCTD6Q8NC69 237 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 TSC1Q92574 1164 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 HMCESQ96FZ2 354 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 SPACA7Q96KW9 195 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 CSPG4P5Q96PW8 444 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 DUSP15Q9H1R2 295 aaPredicted RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 USP36Q9P275 1121 aaKnown RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
PRPF19-204ENST00000539960 WDR87Q6ZQQ6 2873 aa13.72□□□□□ -0.21
PRPF19-204ENST00000539960 FANCMQ8IYD8 2048 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 DOCK4Q8N1I0 1966 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 IGHV1OR15-9A0A0B4J2B8 117 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 RCCD1A6NED2 376 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 ZSCAN5CA6NGD5 496 aaPredicted RBP13.71□□□□□ -0.21
PRPF19-204ENST00000539960 MCF2LO15068 1137 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 GFRA3O60609 400 aa13.71□□□□□ -0.21
PRPF19-204ENST00000539960 RHOBTB1O94844 696 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms