RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 UNC45BQ8IWX7 931 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 OR2T34Q8NGX1 318 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 TSC1Q92574 1164 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 KLK6Q92876 244 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 TTC17Q96AE7 1141 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 FCRL2Q96LA5 508 aaPredicted RBP15.4■□□□□ 0.06
USB1-203ENST00000539737 DDX50Q9BQ39 737 aaKnown RBP15.4■□□□□ 0.06
USB1-203ENST00000539737 NLRC4Q9NPP4 1024 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 GDF3Q9NR23 364 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 SUN2Q9UH99 717 aa15.4■□□□□ 0.06
USB1-203ENST00000539737 HECTD1Q9ULT8 2610 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 C10orf142B7Z368 130 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 TLR4O00206 839 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 TRIM38O00635 465 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 TEX33O43247 280 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 LTFP02788 710 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 FYNP06241 537 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 TPM3P06753 285 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 CYP11B1P15538 503 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 DRD3P35462 400 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 SOX5P35711 763 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 RPL34P49207 117 aaKnown RBP15.39■□□□□ 0.05
USB1-203ENST00000539737 SNX16P57768 344 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 ST8SIA6P61647 398 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 CXADRP78310 365 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 FANCCQ00597 558 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 INSM1Q01101 510 aaPredicted RBP15.39■□□□□ 0.05
USB1-203ENST00000539737 PDCLQ13371 301 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 INAVAQ3KP66 663 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 DCAF6Q58WW2 860 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 RAP1GAP2Q684P5 730 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 NUGGCQ68CJ6 796 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 MSANTD2Q6P1R3 559 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.39■□□□□ 0.05
USB1-203ENST00000539737 ZNF557Q8N988 423 aaPredicted RBP15.39■□□□□ 0.05
USB1-203ENST00000539737 SEMA4CQ9C0C4 833 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 PDCL3Q9H2J4 239 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 ST7Q9NRC1 585 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 UCKL1Q9NWZ5 548 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 SARDHQ9UL12 918 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 NAALADL1Q9UQQ1 740 aa15.39■□□□□ 0.05
USB1-203ENST00000539737 RNF103O00237 685 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 CAPN9O14815 690 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 CASC3O15234 703 aaKnown RBP15.38■□□□□ 0.05
USB1-203ENST00000539737 GFPT2O94808 682 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 LSM8O95777 96 aaKnown RBP15.38■□□□□ 0.05
USB1-203ENST00000539737 IL1BP01584 269 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 HNF1BP35680 557 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 IRAK1P51617 712 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 SFMBT2Q5VUG0 894 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 LRRC69Q6ZNQ3 347 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 USP30Q70CQ3 517 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 TAC4Q86UU9 113 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 ERICH1Q86X53 443 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 ZNF677Q86XU0 584 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 SPACA3Q8IXA5 215 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 LGI2Q8N0V4 545 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 HJURPQ8NCD3 748 aaPredicted RBP15.38■□□□□ 0.05
USB1-203ENST00000539737 FIBINQ8TAL6 211 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 EPS8L1Q8TE68 723 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 DQX1Q8TE96 717 aaKnown RBP15.38■□□□□ 0.05
USB1-203ENST00000539737 PTPRN2Q92932 1015 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 FAM149B1Q96BN6 582 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 SLC4A5Q9BY07 1137 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 CPNE5Q9HCH3 593 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 MYO6Q9UM54 1294 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3DA0A087WVF3 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3IA0A087WXS9 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3EA0A087X179 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3KA0A087X1G2 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3FA6NER0 549 aaPredicted RBP15.37■□□□□ 0.05
USB1-203ENST00000539737 LRRC72A6NJI9 287 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3LB9A6J9 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 FFAR2O15552 330 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 IRAK2O43187 625 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 CCDC172P0C7W6 258 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3HP0C7X1 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 PDGFRAP16234 1089 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 GLDCP23378 1020 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 MZF1P28698 734 aaPredicted RBP15.37■□□□□ 0.05
USB1-203ENST00000539737 GGCXP38435 758 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 UBASH3AP57075 661 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TLE3Q04726 772 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 CDH18Q13634 790 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 NR1I3Q14994 352 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 MS4A13Q5J8X5 152 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3GQ6DHY5 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3CQ6IPX1 549 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TMC6Q7Z403 805 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 NOP9Q86U38 636 aaKnown RBP15.37■□□□□ 0.05
USB1-203ENST00000539737 PASD1Q8IV76 773 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 TBC1D3Q8IZP1 549 aaPredicted RBP15.37■□□□□ 0.05
USB1-203ENST00000539737 TMEM35BQ8NCS4 154 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 MSANTD4Q8NCY6 345 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 C1orf131Q8NDD1 294 aaKnown RBP15.37■□□□□ 0.05
USB1-203ENST00000539737 NAP1L5Q96NT1 182 aaPredicted RBP15.37■□□□□ 0.05
USB1-203ENST00000539737 SERPINB11Q96P15 392 aa15.37■□□□□ 0.05
USB1-203ENST00000539737 IRX2Q9BZI1 471 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms