RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ZNF783Q6ZMS7 281 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 TMEM25Q86YD3 366 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ZNF567Q8N184 647 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 SMRP1Q8NCR6 262 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 USP33Q8TEY7 942 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 OSCP1Q8WVF1 389 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 IRF7Q92985 503 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 NECTIN4Q96NY8 510 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 VAT1Q99536 393 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 SPON2Q9BUD6 331 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 NEUROG2Q9H2A3 272 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ZFP14Q9HCL3 533 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ATP13A1Q9HD20 1204 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 TPX2Q9ULW0 747 aaKnown RBP16.51■□□□□ 0.23
TRAF3-204ENST00000539721 MYOFQ9NZM1 2061 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.51■□□□□ 0.23
TRAF3-204ENST00000539721 NEDD8-MDP1E9PL57 170 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 J3KR12 359 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 OPHN1O60890 802 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 JCHAINP01591 159 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 CCNB1P14635 433 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ECHS1P30084 290 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ETFBP38117 255 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 NUMBP49757 651 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 OXCT1P55809 520 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 IFI35P80217 286 aaPredicted RBP16.51■□□□□ 0.23
TRAF3-204ENST00000539721 IL10RBQ08334 325 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 TEX44Q53QW1 395 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 FSCBQ5H9T9 825 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 FBXO38Q6PIJ6 1188 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 PID1Q7Z2X4 250 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 PCGF5Q86SE9 256 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ST13P5Q8NFI4 369 aaPredicted RBP16.51■□□□□ 0.23
TRAF3-204ENST00000539721 FBXO25Q8TCJ0 367 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 WFDC5Q8TCV5 224 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ANKRD7Q92527 254 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 ART4Q93070 314 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 BBS2Q9BXC9 721 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 FAM129AQ9BZQ8 928 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 RAB6BQ9NRW1 208 aa16.51■□□□□ 0.23
TRAF3-204ENST00000539721 KIF26AQ9ULI4 1882 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-204ENST00000539721 NEBLO76041 1014 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 CAV1Q03135 178 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 CCDC85BQ15834 202 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-204ENST00000539721 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 FAXCQ5TGI0 409 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 RNF43Q68DV7 783 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 TANGO2Q6ICL3 276 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 ADGRG2Q8IZP9 1017 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAF3-204ENST00000539721 FATE1Q969F0 183 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 E2F7Q96AV8 911 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 AGAP3Q96P47 875 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 ZDHHC18Q9NUE0 388 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 THG1LQ9NWX6 298 aaKnown RBP16.5■□□□□ 0.23
TRAF3-204ENST00000539721 TRHDEQ9UKU6 1024 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
TRAF3-204ENST00000539721 USP15Q9Y4E8 981 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-204ENST00000539721 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 H3BQ06 376 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 KDELR3O43731 214 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 PRAMEF11O60813 436 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 METTL18O95568 372 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 PENKP01210 267 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 LAMP2P13473 410 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 MZF1P28698 734 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 CSKP41240 450 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 EML3Q32P44 896 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 RNASEH2BQ5TBB1 312 aaKnown RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 TRIM68Q6AZZ1 485 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 ITPRIPL1Q6GPH6 555 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 HIBCHQ6NVY1 386 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 Q7L0L9 218 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 PPIL6Q8IXY8 311 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 FIBINQ8TAL6 211 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 CPT1BQ92523 772 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 MAML1Q92585 1016 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 FMO2Q99518 471 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 IL12RB2Q99665 862 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 MTRF1LQ9UGC7 380 aaKnown RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 CLEC4EQ9ULY5 219 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 F5H423 210 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 ZBTB24O43167 697 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 TYRP14679 529 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 FDFT1P37268 417 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 HNRNPDQ14103 355 aaKnown RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 MORF4L2Q15014 288 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 SKIV2LQ15477 1246 aaKnown RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 RHBDF2Q6PJF5 856 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 VITQ6UXI7 678 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 LEKR1Q6ZMV7 388 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 AENQ8WTP8 325 aaKnown RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 TEKT5Q96M29 485 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 CDX2Q99626 313 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 ACE2Q9BYF1 805 aaPredicted RBP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 ETNK1Q9HBU6 452 aa16.49■□□□□ 0.23
TRAF3-204ENST00000539721 RBM22Q9NW64 420 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRAF3-204ENST00000539721 MARK1Q9P0L2 795 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms