RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 VWA5AO00534 786 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 HTRA2O43464 458 aaPredicted RBP17.54■□□□□ 0.4
C2CD3-213ENST00000539061 C2P06681 752 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 FGFR3P22607 806 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 GRIA4P48058 902 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 PSME3P61289 254 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 SP2Q02086 613 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 MPP3Q13368 585 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 URGCPQ8TCY9 931 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 NRBP2Q9NSY0 501 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 COPG1Q9Y678 874 aaKnown RBP17.54■□□□□ 0.4
C2CD3-213ENST00000539061 RGS7P49802 495 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 PRKAA2P54646 552 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 TARBP2Q15633 366 aaKnown RBP17.54■□□□□ 0.4
C2CD3-213ENST00000539061 KCTD21Q4G0X4 260 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 LIPMQ5VYY2 423 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 GRAMD4Q6IC98 578 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 LCLAT1Q6UWP7 414 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 ZBTB8OSQ8IWT0 167 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 C1orf127Q8N9H9 656 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 BORCS5Q969J3 196 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 MOCOSQ96EN8 888 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 MARK4Q96L34 752 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 DCUN1D5Q9BTE7 237 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 ANLNQ9NQW6 1124 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 GGA3Q9NZ52 723 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 ZDHHC2Q9UIJ5 367 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 TSPAN16Q9UKR8 245 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 CDH7Q9ULB5 785 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 ZNF232Q9UNY5 417 aa17.54■□□□□ 0.4
C2CD3-213ENST00000539061 YDJCA8MPS7 323 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PSMD8P48556 350 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 RELAQ04206 551 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 DLG2Q15700 870 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 ANKDD1AQ495B1 522 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 MTX3Q5HYI7 312 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 MPZL3Q6UWV2 235 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 OLFML1Q6UWY5 402 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PTAR1Q7Z6K3 402 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 TTC30AQ86WT1 665 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 HERC6Q8IVU3 1022 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 FAM47BQ8NA70 645 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 THAP11Q96EK4 314 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 CIB1Q99828 191 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 EFHD1Q9BUP0 239 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 ACE2Q9BYF1 805 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PAIP1Q9H074 479 aaKnown RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 CAB39LQ9H9S4 337 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 HESX1Q9UBX0 185 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PSMD12O00232 456 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 CYP3A5P20815 502 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 SLC7A1P30825 629 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 SLC5A3P53794 718 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PFKPQ01813 784 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 NSUN2Q08J23 767 aaKnown RBP eCLIP17.53■□□□□ 0.41e-36■■■■■ 142.5
C2CD3-213ENST00000539061 ZNF829Q3KNS6 432 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 ZYG11AQ6WRX3 759 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 ZBTB49Q6ZSB9 765 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 RDH11Q8TC12 318 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 ATG4CQ96DT6 458 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 FCRL3Q96P31 734 aaPredicted RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 CSPG4P5Q96PW8 444 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 IL22Q9GZX6 179 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PCDHAC1Q9H158 963 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PTBP2Q9UKA9 531 aaKnown RBP17.53■□□□□ 0.4
C2CD3-213ENST00000539061 PCDHGA7Q9Y5G6 932 aa17.53■□□□□ 0.4
C2CD3-213ENST00000539061 TRIM64CA6NLI5 447 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 PLOD2O00469 737 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 ZNF12P17014 697 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 CCR10P46092 362 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 SLC6A3Q01959 620 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 TRAP1Q12931 704 aaKnown RBP17.52■□□□□ 0.4
C2CD3-213ENST00000539061 FKBP1CQ5VVH2 108 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 MAP1SQ66K74 1059 aaPredicted RBP17.52■□□□□ 0.4
C2CD3-213ENST00000539061 RPAP3Q9H6T3 665 aaPredicted RBP17.52■□□□□ 0.4
C2CD3-213ENST00000539061 RPF1Q9H9Y2 349 aaKnown RBP17.52■□□□□ 0.4
C2CD3-213ENST00000539061 ACSS2Q9NR19 701 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 INIPQ9NRY2 104 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
C2CD3-213ENST00000539061 MAFO75444 373 aaPredicted RBP17.52■□□□□ 0.39
C2CD3-213ENST00000539061 IL18RAPO95256 599 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 ITGB3P05106 788 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 HSPA1AP0DMV8 641 aaKnown RBP17.52■□□□□ 0.39
C2CD3-213ENST00000539061 HSPA1BP0DMV9 641 aaKnown RBP17.52■□□□□ 0.39
C2CD3-213ENST00000539061 NHSL2Q5HYW2 709 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 NCBP2-AS2Q69YL0 99 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 PCDH20Q8N6Y1 951 aaKnown RBP17.52■□□□□ 0.39
C2CD3-213ENST00000539061 LPGAT1Q92604 370 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 UHRF1Q96T88 793 aaPredicted RBP17.52■□□□□ 0.39
C2CD3-213ENST00000539061 LGMNQ99538 433 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 LRRC40Q9H9A6 602 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 SCN4AP35499 1836 aa17.52■□□□□ 0.39
C2CD3-213ENST00000539061 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
C2CD3-213ENST00000539061 CABYRO75952 493 aa17.51■□□□□ 0.39
C2CD3-213ENST00000539061 PFKMP08237 780 aa17.51■□□□□ 0.39
C2CD3-213ENST00000539061 CXCL8P10145 99 aa17.51■□□□□ 0.39
C2CD3-213ENST00000539061 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
C2CD3-213ENST00000539061 CCR3P51677 355 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms