RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 THOP1P52888 689 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 KRR1Q13601 381 aaKnown RBP6.96□□□□□ -1.29
SCAPER-203ENST00000538941 ZNF846Q147U1 533 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 TLR1Q15399 786 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 MYLK3Q32MK0 819 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 EGFLAMQ63HQ2 1017 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 MBLAC2Q68D91 279 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 TRMT10BQ6PF06 316 aaKnown RBP6.96□□□□□ -1.29
SCAPER-203ENST00000538941 POTEHQ6S545 545 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 EFL1Q7Z2Z2 1120 aaKnown RBP6.96□□□□□ -1.29
SCAPER-203ENST00000538941 TMEM110Q86TL2 294 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 IPMKQ8NFU5 416 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 FNDC8Q8TC99 324 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 RSPH1Q8WYR4 309 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 TUBGCP3Q96CW5 907 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 BRD8Q9H0E9 1235 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 COQ10BQ9H8M1 238 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 KIF17Q9P2E2 1029 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 ARHGAP28Q9P2N2 729 aa6.96□□□□□ -1.29
SCAPER-203ENST00000538941 RABL2AQ9UBK7 228 aaPredicted RBP6.96□□□□□ -1.29
SCAPER-203ENST00000538941 ANKRD36CQ5JPF3 1778 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 EDIL3O43854 480 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CABYRO75952 493 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 VNN1O95497 513 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 SLC4A1P02730 911 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 MMP10P09238 476 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CXCL8P10145 99 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ETV4P43268 484 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 TUBA4AP68366 448 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 BNIP2Q12982 314 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 GRM1Q13255 1194 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 MSLNQ13421 630 aaPredicted RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 RBBP7Q16576 425 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 LSM12Q3MHD2 195 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 FUT11Q495W5 492 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 FAM131BQ86XD5 332 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 PDPRQ8NCN5 879 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 LRTOMTQ8WZ04 291 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF516Q92618 1163 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ZNF560Q96MR9 790 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CPXM1Q96SM3 734 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 MTG1Q9BT17 334 aaPredicted RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 NDEL1Q9GZM8 345 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CXorf21Q9HAI6 301 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 DPP3Q9NY33 737 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 TMEM216Q9P0N5 145 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 DOLKQ9UPQ8 538 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 AAR2Q9Y312 384 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 NDUFAF1Q9Y375 327 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 TELO2Q9Y4R8 837 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 PLA2G6O60733 806 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 NPM3O75607 178 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ANXA9O76027 345 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ZBTB11O95625 1053 aaPredicted RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CDH2P19022 906 aaPredicted RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 HOXA10P31260 410 aaPredicted RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 FKBP1AP62942 108 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CCNA1P78396 465 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CHRNB3Q05901 458 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 NSUN2Q08J23 767 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CDH17Q12864 832 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 TRIM25Q14258 630 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 CSHL1Q14406 222 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 KCTD2Q14681 263 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 HERC3Q15034 1050 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 DGUOKQ16854 277 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 SLC9B1Q4ZJI4 515 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 TMTC4Q5T4D3 741 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ACOT1Q86TX2 421 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 IGDCC3Q8IVU1 814 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 SFRP1Q8N474 314 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ATPAF2Q8N5M1 289 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 FBXO27Q8NI29 283 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 DQX1Q8TE96 717 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 ATG4CQ96DT6 458 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 APOL2Q9BQE5 337 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 NTPCRQ9BSD7 190 aaKnown RBP6.96□□□□□ -1.3
SCAPER-203ENST00000538941 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
SCAPER-203ENST00000538941 A0A087X1B8 175 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 DHRS12A0PJE2 317 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 NCAM2O15394 837 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 ASNA1O43681 348 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 GCATO75600 419 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 TIPRLO75663 272 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 RFPL1O75677 317 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 XRCC1P18887 633 aaPredicted RBP6.95□□□□□ -1.3
SCAPER-203ENST00000538941 ACO1P21399 889 aaKnown RBP6.95□□□□□ -1.3
SCAPER-203ENST00000538941 NFKBIAP25963 317 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 TNFSF9P41273 254 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 ABCG1P45844 678 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 CLK1P49759 484 aaKnown RBP6.95□□□□□ -1.3
SCAPER-203ENST00000538941 SLC25A11Q02978 314 aaKnown RBP6.95□□□□□ -1.3
SCAPER-203ENST00000538941 SPIDRQ14159 915 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 TIFABQ6ZNK6 161 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 CDHR3Q6ZTQ4 885 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 PIWIL4Q7Z3Z4 852 aaKnown RBP6.95□□□□□ -1.3
SCAPER-203ENST00000538941 CCDC103Q8IW40 242 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 SULF1Q8IWU6 871 aa6.95□□□□□ -1.3
SCAPER-203ENST00000538941 OR52K1Q8NGK4 314 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms