RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CXXC1Q9P0U4 656 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-205ENST00000538545 PTPRSQ13332 1948 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 FAM159BA6NKW6 160 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 LPXNO60711 386 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SOD2P04179 222 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 GJA8P48165 433 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 TWF1Q12792 350 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SH2D5Q6ZV89 423 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 C16orf59Q7L2K0 433 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 LGI2Q8N0V4 545 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SLC39A11Q8N1S5 342 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SLC25A41Q8N5S1 370 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 ZNF461Q8TAF7 563 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 TTC17Q96AE7 1141 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 CABS1Q96KC9 395 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 BTN2A3PQ96KV6 586 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SPATA17Q96L03 361 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 ZNF558Q96NG5 402 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 FICDQ9BVA6 458 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 ZYG11BQ9C0D3 744 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 CLIC5Q9NZA1 410 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 ACTL7BQ9Y614 415 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 IQANK1A0A1B0GTG1 560 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 GJA1P17302 382 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 GLDCP23378 1020 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 OR1E1P30953 314 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 RPL10AP62906 217 aaKnown RBP14.4□□□□□ -0.1
ACTN1-205ENST00000538545 HSP90AA5PQ58FG0 334 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 GKAP1Q5VSY0 366 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SRLQ86TD4 932 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 RNF135Q8IUD6 432 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 ACVR1CQ8NER5 493 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SEZ6LQ9BYH1 1024 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 SAMD15Q9P1V8 674 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 YIPF1Q9Y548 306 aa14.4□□□□□ -0.1
ACTN1-205ENST00000538545 ZNF840PA6NDX5 716 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 PRRG1O14668 218 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 FGF10O15520 208 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.118e-7■■■□□ 17.4
ACTN1-205ENST00000538545 RFPL1O75677 317 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 PEX11BO96011 259 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 ZDHHC11BP0C7U3 371 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 CCNCP24863 283 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 ZXDBP98169 803 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 DSC2Q02487 901 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 HHATQ5VTY9 493 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 CACNA2D3Q8IZS8 1091 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 ATP6V0D2Q8N8Y2 350 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 RC3H2Q9HBD1 1191 aaKnown RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 TRPC7Q9HCX4 862 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 ANAPC1Q9H1A4 1944 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 CCL22O00626 93 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 MATN3O15232 486 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 NEBLO76041 1014 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 TIMP1P01033 207 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 ATP5C1P36542 298 aaKnown RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 OVGP1Q12889 678 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 TAF12Q16514 161 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 C16orf46Q6P387 395 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 ARHGAP18Q8N392 663 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 OR7D4Q8NG98 312 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 UBE2OQ9C0C9 1292 aaKnown RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 GLOD4Q9HC38 313 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 CASS4Q9NQ75 786 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 EIF2B3Q9NR50 452 aaKnown RBP14.39□□□□□ -0.11
ACTN1-205ENST00000538545 SLC2A6Q9UGQ3 507 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 MYOFQ9NZM1 2061 aa14.39□□□□□ -0.11
ACTN1-205ENST00000538545 TEX28O15482 410 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 PRKCGP05129 697 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 PGAM1P18669 254 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 CDK16Q00536 496 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 NR1H3Q13133 447 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 FAM133BQ5BKY9 247 aaKnown RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 TTC39BQ5VTQ0 682 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 CMC1Q7Z7K0 106 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 RASSF3Q86WH2 238 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 C1orf74Q96LT6 269 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 IL12RB2Q99665 862 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 CCDC134Q9H6E4 229 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF395Q9H8N7 513 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 PRDM16Q9HAZ2 1276 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF334Q9HCZ1 680 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZNF358Q9NW07 568 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 BFARQ9NZS9 450 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 PRUNE2Q8WUY3 3088 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 MIA3Q5JRA6 1907 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 ZCWPW2A0A1B0GU75 182 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 CCDC195A0A1B0GUA6 201 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 MUSKO15146 869 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 SPAG6O75602 509 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 IGLV3-27P01718 113 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 SNRPAP09012 282 aaKnown RBP14.38□□□□□ -0.11
ACTN1-205ENST00000538545 MLNP12872 115 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 TACR2P21452 398 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 IL9RQ01113 521 aa14.38□□□□□ -0.11
ACTN1-205ENST00000538545 NIPAL4Q0D2K0 466 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms