RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 DENND5AQ6IQ26 1287 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 FAM43BQ6ZT52 329 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 MON1AQ86VX9 555 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 RNF34Q969K3 372 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 SLC39A8Q9C0K1 460 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 TRPV6Q9H1D0 765 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 ELAC1Q9H777 363 aaKnown RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 GLOD4Q9HC38 313 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 PRDM5Q9NQX1 630 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 ARL8BQ9NVJ2 186 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 IL1RAPL1Q9NZN1 696 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 SFMBT1Q9UHJ3 866 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 HS3ST4Q9Y661 456 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 CENPFP49454 3210 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 E9PAM4 449 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 SIN3BO75182 1162 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 PEX11BO96011 259 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 ALOX15P16050 662 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 NFE2Q16621 373 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 PAXIP1Q6ZW49 1069 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 ARHGAP18Q8N392 663 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 DCLK2Q8N568 766 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 PXYLP1Q8TE99 480 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 ATP2A3Q93084 1043 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 MFSD3Q96ES6 412 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 PRR11Q96HE9 360 aaPredicted RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF778Q96MU6 729 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 MIPEPQ99797 713 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 TBC1D10AQ9BXI6 508 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 FTHL17Q9BXU8 183 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 STN1Q9H668 368 aaKnown RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 NOL6Q9H6R4 1146 aaKnown RBP9.49□□□□□ -0.89
UBE3B-207ENST00000537063 NSMCE4AQ9NXX6 385 aa9.49□□□□□ -0.89
UBE3B-207ENST00000537063 MIA3Q5JRA6 1907 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 IGLV3-10A0A075B6K4 115 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 ANXA9O76027 345 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 MPOP05164 745 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 HADHAP40939 763 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 MNAT1P51948 309 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 MLLT6P55198 1093 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 STX3Q13277 289 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CCDC153Q494R4 210 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 PIK3R6Q5UE93 754 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 LHX8Q68G74 356 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TIGD7Q6NT04 549 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 RWDD4Q6NW29 188 aaKnown RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 OTOP3Q7RTS5 596 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 KCNMB4Q86W47 210 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 NUP93Q8N1F7 819 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 UMODL1-AS1Q8N2C9 162 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 DNAAF3Q8N9W5 541 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 SH3TC2Q8TF17 1288 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 AGAP2Q99490 1192 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TBL1YQ9BQ87 522 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 FBXO44Q9H4M3 255 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 FBXO6Q9NRD1 293 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TMEM161AQ9NX61 479 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 PPARGC1AQ9UBK2 798 aaKnown RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CHD5Q8TDI0 1954 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CCDC195A0A1B0GUA6 201 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 A0A1W2PQ45 241 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 A0A1W2PQY0 241 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 SERPINE1P05121 402 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 SRGAP2BP0DMP2 458 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CDK7P50613 346 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 NOGQ13253 232 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TUBB3Q13509 450 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 PDPK2PQ6A1A2 396 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 STRA8Q7Z7C7 330 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 GLT1D1Q96MS3 346 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 GPR22Q99680 433 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 WWP1Q9H0M0 922 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CHRAC1Q9NRG0 131 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 COPG2Q9UBF2 871 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 DNAJB4Q9UDY4 337 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 BAIAP2L1Q9UHR4 511 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 DFFAO00273 331 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 FCHO1O14526 889 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 TIMM44O43615 452 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 IGLV3-27P01718 113 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 NEFHP12036 1026 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CALB2P22676 271 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 CCND1P24385 295 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 GRK2P25098 689 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 DNAJB1P25685 340 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 NMBRP28336 390 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 HARS2P49590 506 aaKnown RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 C16orf46Q6P387 395 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 C14orf80Q86SX3 495 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 AGAP11Q8TF27 550 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 NSL1Q96IY1 281 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 SORT1Q99523 831 aa9.48□□□□□ -0.89
UBE3B-207ENST00000537063 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.48□□□□□ -0.89
UBE3B-207ENST00000537063 ZNF395Q9H8N7 513 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms