RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRKDC-208ENST00000536710 Q9N2J8 555 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 TXNRD2Q9NNW7 524 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 PCDHB16Q9NRJ7 776 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 KCND2Q9NZV8 630 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 PEMTQ9UBM1 199 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 HDAC6Q9UBN7 1215 aa5.83□□□□□ -1.48
PRKDC-208ENST00000536710 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-208ENST00000536710 CXorf65A6NEN9 183 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 GFPT2O94808 682 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 SGPL1O95470 568 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 PLAUP00749 431 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 STAT1P42224 750 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 PTPN9P43378 593 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 PTH2RP49190 550 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 CTCFP49711 727 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-208ENST00000536710 CYP2J2P51589 502 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 ARF3P61204 181 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-208ENST00000536710 ARF1P84077 181 aaKnown RBP5.82□□□□□ -1.48
PRKDC-208ENST00000536710 EFNB1P98172 346 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 RHAGQ02094 409 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 ZBTB16Q05516 673 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 PTP4A2Q12974 167 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 ERV3-1Q14264 604 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 FBXO43Q4G163 708 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 FAM171A1Q5VUB5 890 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 AADACL2Q6P093 401 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 Q8N1X5 172 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 PAQR4Q8N4S7 273 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-208ENST00000536710 TMEM217Q8N7C4 229 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 SETD9Q8NE22 299 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 OSR1Q8TAX0 266 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-208ENST00000536710 ZFPM2Q8WW38 1151 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 P2RY11Q96G91 374 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 ZDHHC7Q9NXF8 308 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 INSL6Q9Y581 213 aa5.82□□□□□ -1.48
PRKDC-208ENST00000536710 OR6C68A6NDL8 312 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 TMEM247A6NEH6 219 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 C17orf100A8MU93 164 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 PRRG2O14669 202 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 USP12O75317 370 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 SPARCP09486 303 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 COX7A2P14406 83 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 PROZP22891 400 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 RPS6KB1P23443 525 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 CHRNA5P30532 468 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 ARL3P36405 182 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 CLNS1AP54105 237 aaKnown RBP5.81□□□□□ -1.48
PRKDC-208ENST00000536710 KRTAP10-2P60368 255 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 FHL2Q14192 279 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 TOMM20Q15388 145 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 C5orf22Q49AR2 442 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 ZNF667Q5HYK9 610 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 ZNF362Q5T0B9 420 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-208ENST00000536710 INO80CQ6PI98 192 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-208ENST00000536710 NEK10Q6ZWH5 1172 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 LDLRAD3Q86YD5 345 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 CPXM2Q8N436 756 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 PLD5Q8N7P1 536 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 ETNPPLQ8TBG4 499 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 SAAL1Q96ER3 474 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 LBHD1Q9BQE6 289 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-208ENST00000536710 GATA5Q9BWX5 397 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-208ENST00000536710 DIAPH3Q9NSV4 1193 aa5.81□□□□□ -1.48
PRKDC-208ENST00000536710 ARPP21Q9UBL0 812 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-208ENST00000536710 TDRD9Q8NDG6 1382 aaKnown RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 CYP2D7A0A087X1C5 515 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 SLC22A23A1A5C7 686 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 KCNJ18B7U540 433 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 TNFSF14O43557 240 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 IL1AP01583 271 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 CLEC3BP05452 202 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 HSP90AA1P07900 732 aaKnown RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 KLRC2P26717 231 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 HOXA7P31268 230 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 ABCD1P33897 745 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 ARL1P40616 181 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 BUD31P41223 144 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 CPA2P48052 419 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 TUBA4AP68366 448 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 PRKG2Q13237 762 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 SEMA3AQ14563 771 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 ZNF268Q14587 947 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 PROSER3Q2NL68 480 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 EDRF1Q3B7T1 1238 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 SLC9B1Q4ZJI4 515 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 TMEM268Q5VZI3 342 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 FCRLBQ6BAA4 426 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 TTLL5Q6EMB2 1281 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 TMEM81Q6P7N7 255 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 LRIG3Q6UXM1 1119 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 CYB5R4Q7L1T6 521 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 FASTKD5Q7L8L6 764 aaKnown RBP5.8□□□□□ -1.48
PRKDC-208ENST00000536710 ADGRF4Q8IZF3 695 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 NGEFQ8N5V2 710 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 KLHL29Q96CT2 875 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 KRTAP9-2Q9BYQ4 174 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 MLXIPLQ9NP71 852 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 ENTPD7Q9NQZ7 604 aa5.8□□□□□ -1.48
PRKDC-208ENST00000536710 EIF2B3Q9NR50 452 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms