RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 TIMM44O43615 452 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 LRIG2O94898 1065 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 MOCS3O95396 460 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 RHOQP17081 205 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 SLC1A1P43005 524 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 KIR2DL1P43626 348 aaPredicted RBP13.02□□□□□ -0.33
DDB1-207ENST00000535967 MAPKAPK2P49137 400 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 LMAN2Q12907 356 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
DDB1-207ENST00000535967 DPYSL2Q16555 572 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 GEN1Q17RS7 908 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 ARTNQ5T4W7 220 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 IL31Q6EBC2 164 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 TCEAL6Q6IPX3 200 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 CXorf57Q6NSI4 855 aaKnown RBP13.02□□□□□ -0.33
DDB1-207ENST00000535967 ZNF783Q6ZMS7 281 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 POLNQ7Z5Q5 900 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.33
DDB1-207ENST00000535967 USP33Q8TEY7 942 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 GAB3Q8WWW8 586 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 TCEAL3Q969E4 200 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 PPP1R9BQ96SB3 815 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 TBC1D30Q9Y2I9 924 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 SNX10Q9Y5X0 201 aa13.02□□□□□ -0.33
DDB1-207ENST00000535967 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
DDB1-207ENST00000535967 PRRT4C9JH25 899 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 FAM72CH0Y354 149 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 RPP40O75818 363 aaKnown RBP13.01□□□□□ -0.33
DDB1-207ENST00000535967 EPN2O95208 641 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 ASLP04424 464 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 KRT7P08729 469 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 ZNF806P0C7X5 589 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 HNRNPLP14866 589 aaKnown RBP eCLIP13.01□□□□□ -0.336e-6■■■□□ 18.9
DDB1-207ENST00000535967 CD70P32970 193 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 IRAK1P51617 712 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 PLK1P53350 603 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 LIMK1P53667 647 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 TPI1P60174 286 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 CCZ1BP86790 482 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 CCZ1P86791 482 aaPredicted RBP13.01□□□□□ -0.33
DDB1-207ENST00000535967 MESDQ14696 234 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 FUT11Q495W5 492 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 ALFQ53S48 1182 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 C6orf118Q5T5N4 469 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 STPG1Q5TH74 334 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 FAM72AQ5TYM5 149 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 FAM72DQ6L9T8 149 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 C11orf63Q6NUN7 778 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 FAM72BQ86X60 149 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 ZNF513Q8N8E2 541 aaPredicted RBP13.01□□□□□ -0.33
DDB1-207ENST00000535967 RPLP0P6Q8NHW5 317 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
DDB1-207ENST00000535967 CATSPERBQ9H7T0 1116 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 TMEM248Q9NWD8 314 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 DONSONQ9NYP3 566 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 ZNF212Q9UDV6 495 aa13.01□□□□□ -0.33
DDB1-207ENST00000535967 ANKRD11Q6UB99 2663 aaPredicted RBP13□□□□□ -0.33
DDB1-207ENST00000535967 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
DDB1-207ENST00000535967 WASH4PA8MWX3 477 aa13□□□□□ -0.33
DDB1-207ENST00000535967 CREB3O43889 395 aa13□□□□□ -0.33
DDB1-207ENST00000535967 CNTN5O94779 1100 aa13□□□□□ -0.33
DDB1-207ENST00000535967 ATP5BP06576 529 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 RHOCP08134 193 aa13□□□□□ -0.33
DDB1-207ENST00000535967 RARAP10276 462 aa13□□□□□ -0.33
DDB1-207ENST00000535967 TCF4P15884 667 aa13□□□□□ -0.33
DDB1-207ENST00000535967 POLR2EP19388 210 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 IL1R2P27930 398 aa13□□□□□ -0.33
DDB1-207ENST00000535967 EPHB2P29323 1055 aa13□□□□□ -0.33
DDB1-207ENST00000535967 ETFBP38117 255 aa13□□□□□ -0.33
DDB1-207ENST00000535967 SSR1P43307 286 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 HCAR3P49019 387 aa13□□□□□ -0.33
DDB1-207ENST00000535967 SEC13P55735 322 aa13□□□□□ -0.33
DDB1-207ENST00000535967 KIF5AQ12840 1032 aa13□□□□□ -0.33
DDB1-207ENST00000535967 IFI16Q16666 785 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 PLEKHG6Q3KR16 790 aa13□□□□□ -0.33
DDB1-207ENST00000535967 FSCBQ5H9T9 825 aa13□□□□□ -0.33
DDB1-207ENST00000535967 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
DDB1-207ENST00000535967 MBLAC2Q68D91 279 aa13□□□□□ -0.33
DDB1-207ENST00000535967 RWDD4Q6NW29 188 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
DDB1-207ENST00000535967 NLRP14Q86W24 1093 aa13□□□□□ -0.33
DDB1-207ENST00000535967 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
DDB1-207ENST00000535967 PYROXD2Q8N2H3 581 aa13□□□□□ -0.33
DDB1-207ENST00000535967 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
DDB1-207ENST00000535967 DESI2Q9BSY9 194 aa13□□□□□ -0.33
DDB1-207ENST00000535967 TSGA10Q9BZW7 698 aa13□□□□□ -0.33
DDB1-207ENST00000535967 ZWILCHQ9H900 591 aa13□□□□□ -0.33
DDB1-207ENST00000535967 STAU2Q9NUL3 570 aaKnown RBP eCLIP13□□□□□ -0.33
DDB1-207ENST00000535967 GPATCH2LQ9NWQ4 482 aa13□□□□□ -0.33
DDB1-207ENST00000535967 ELOVL2Q9NXB9 296 aa13□□□□□ -0.33
DDB1-207ENST00000535967 MPP6Q9NZW5 540 aa13□□□□□ -0.33
DDB1-207ENST00000535967 RCOR3Q9P2K3 495 aaPredicted RBP13□□□□□ -0.33
DDB1-207ENST00000535967 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms