RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 CTSAP10619 480 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 TCF3P15923 654 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 TUFMP49411 452 aaKnown RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 VPS41P49754 854 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ATN1P54259 1190 aaPredicted RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 EFTUD2Q15029 972 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ACCSLQ4AC99 568 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 SDHAF4Q5VUM1 108 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 KDELC1Q6UW63 502 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 UNC5AQ6ZN44 842 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ARHGAP36Q6ZRI8 547 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 VPS52Q8N1B4 723 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 MAB21L3Q8N8X9 362 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ZNF558Q96NG5 402 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 RANBP9Q96S59 729 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 STMN4Q9H169 189 aaPredicted RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 CATSPERBQ9H7T0 1116 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 RAB6BQ9NRW1 208 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 CHCHD3Q9NX63 227 aaKnown RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 SENP1Q9P0U3 644 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ZCWPW2A0A1B0GU75 182 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 SOBPA7XYQ1 873 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 NT5C1B-RDH14C9J2C7 533 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 COQ9O75208 318 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 SOAT2O75908 522 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 GJB5O95377 273 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ASMTLO95671 621 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 DNAJB2P25686 324 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 SLC6A4P31645 630 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ETV4P43268 484 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 SEC24CP53992 1094 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 LAMB3Q13751 1172 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 KLHL38Q2WGJ6 581 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ODF2Q5BJF6 829 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 TLDC1Q6P9B6 456 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 C6orf89Q6UWU4 347 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 CHST9Q7L1S5 443 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 PRPF39Q86UA1 669 aaKnown RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 CCNJLQ8IV13 435 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 ARFGAP2Q8N6H7 521 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 PHOSPHO2Q8TCD6 241 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 IGSF8Q969P0 613 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 TTC17Q96AE7 1141 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 CCT8L2Q96SF2 557 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 PPANQ9NQ55 473 aaKnown RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 PSMC3IPQ9P2W1 217 aaPredicted RBP8.17□□□□□ -1.1
COL21A1-212ENST00000535941 GRID1Q9ULK0 1009 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 YIPF1Q9Y548 306 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 NR2E3Q9Y5X4 410 aa8.17□□□□□ -1.1
COL21A1-212ENST00000535941 NRG2O14511 850 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 AVILO75366 819 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 CREB1P16220 341 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PSMB4P28070 264 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 CDC25CP30307 473 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 GRIA1P42261 906 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 TBX4P57082 545 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PPARDQ03181 441 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 DUSP4Q13115 394 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PDZD4Q76G19 769 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 DEFB128Q7Z7B8 93 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 GALNT7Q86SF2 657 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 BANPQ8N9N5 519 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 MAGEC3Q8TD91 643 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 LRRN4Q8WUT4 740 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 CCSER2Q9H7U1 834 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 CREB3O43889 395 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 APOEP02649 317 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ATP5DP30049 168 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 SSTR1P30872 391 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 STX2P32856 288 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PPM1AP35813 382 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ZXDBP98169 803 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 TMEM240Q5SV17 173 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 STXBP5Q5T5C0 1151 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 NECAB2Q7Z6G3 386 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 TMEM199Q8N511 208 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 GSDMBQ8TAX9 411 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 FBF1Q8TES7 1133 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 FBXO32Q969P5 355 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 STAMBPL1Q96FJ0 436 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 PPP1R2P1Q96PQ5 205 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 KIFC1Q9BW19 673 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ACE2Q9BYF1 805 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ZYG11BQ9C0D3 744 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ATP11BQ9Y2G3 1177 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 TBC1D30Q9Y2I9 924 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 SLC27A5Q9Y2P5 690 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 RGS16O15492 202 aaPredicted RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 COCHO43405 550 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 USP1O94782 785 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 IFNB1P01574 187 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 DRD4P21917 467 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ALDH7A1P49419 539 aaKnown RBP8.16□□□□□ -1.1
COL21A1-212ENST00000535941 ALFQ53S48 1182 aa8.16□□□□□ -1.1
COL21A1-212ENST00000535941 HHATQ5VTY9 493 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms