RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SLC20A2Q08357 652 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 POM121L1PQ3SYA9 428 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 SLC47A2Q86VL8 602 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 TRIM69Q86WT6 500 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 ZNF354CQ86Y25 554 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 RYBPQ8N488 228 aaPredicted RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 SH2D3CQ8N5H7 860 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 BAP1Q92560 729 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 IPO11Q9UI26 975 aaKnown RBP13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 CYTH4Q9UIA0 394 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 CACNA1EQ15878 2313 aa13.58□□□□□ -0.24
CLSTN3-205ENST00000535452 USP24Q9UPU5 2620 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 TRABD2BA6NFA1 517 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 BECN2A8MW95 431 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 H3BM21 787 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 GOLGA8SH3BPF8 625 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 CBX4O00257 560 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 NEMP1O14524 444 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 RTN2O75298 545 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 ERBB2P04626 1255 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 CYP11B1P15538 503 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 CHRNA3P32297 505 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 SCNN1AP37088 669 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 E2F1Q01094 437 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 CNTN1Q12860 1018 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 SLC25A52Q3SY17 297 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 CT47A1Q5JQC4 288 aaPredicted RBP13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 CXorf57Q6NSI4 855 aaKnown RBP13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 FBXL19Q6PCT2 694 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 C19orf48Q6RUI8 117 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 ZNF783Q6ZMS7 281 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 ZSCAN30Q86W11 494 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 DCAF4L2Q8NA75 395 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 MYEOVQ96EZ4 313 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 IL36AQ9UHA7 158 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 PPM1HQ9ULR3 514 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 TBC1D30Q9Y2I9 924 aa13.57□□□□□ -0.24
CLSTN3-205ENST00000535452 MUC22E2RYF6 1773 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 FAM149AA5PLN7 773 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 FOXN3O00409 490 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 SLC31A1O15431 190 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 LATO43561 262 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 THEGLP0DJG4 465 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 CKMT2P17540 419 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 EEF1GP26641 437 aaKnown RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 SDC4P31431 198 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 RXRGP48443 463 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 PITX1P78337 314 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 CYP4F3Q08477 520 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 KCNJ12Q14500 433 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 DRAP1Q14919 205 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 POLD3Q15054 466 aaPredicted RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 PTPN20Q4JDL3 420 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 TFAP2DQ7Z6R9 452 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 ZNF677Q86XU0 584 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 GRIN3AQ8TCU5 1115 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 SAP25Q8TEE9 199 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 FRS2Q8WU20 508 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 HNRNPLLQ8WVV9 542 aaKnown RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 ARHGEF26Q96DR7 871 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 C1orf74Q96LT6 269 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 CALN1Q9BXU9 219 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 ZYG11BQ9C0D3 744 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 ABCG4Q9H172 646 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 SCUBE2Q9NQ36 999 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 PLCB1Q9NQ66 1216 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 PIGVQ9NUD9 493 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 ARHGEF38Q9NXL2 777 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 DKK4Q9UBT3 224 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 RALYQ9UKM9 306 aaKnown RBP13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 RAXQ9Y2V3 346 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 SLCO1B1Q9Y6L6 691 aa13.56□□□□□ -0.24
CLSTN3-205ENST00000535452 LAMA1P25391 3075 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 A0A1W2PQU0 124 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 ILVBLA1L0T0 632 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 SRCP12931 536 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 VAV1P15498 845 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 GGCXP38435 758 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 ABCG1P45844 678 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 CXCR3P49682 368 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 NEK3P51956 506 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 PPP2CBP62714 309 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 PPP2CAP67775 309 aa13.55□□□□□ -0.24
CLSTN3-205ENST00000535452 RAD51Q06609 339 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms