RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 C2CD6Q53TS8 623 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 SLC45A4Q5BKX6 768 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 KCNT1Q5JUK3 1230 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 C6orf118Q5T5N4 469 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 Q6ZVU0 165 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 SH2D3CQ8N5H7 860 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 SERAC1Q96JX3 654 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 GANQ9H2C0 597 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 KDM4CQ9H3R0 1056 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 EBF2Q9HAK2 575 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 SNX10Q9Y5X0 201 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 CHD6Q8TD26 2715 aa16.61■□□□□ 0.25
CLSTN3-204ENST00000535313 DRGXA6NNA5 263 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 MCF2LO15068 1137 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 POLR2FP61218 127 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 CDR2Q01850 454 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 ARCQ7LC44 396 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 PRPF39Q86UA1 669 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 SLCO6A1Q86UG4 719 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 ZNF683Q8IZ20 524 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 ATP11CQ8NB49 1132 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 BAHD1Q8TBE0 780 aaPredicted RBP16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 ZCCHC14Q8WYQ9 949 aaKnown RBP16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 CCDC114Q96M63 670 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 CFAP57Q96MR6 1250 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 HAPLN3Q96S86 360 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 FAM207AQ9NSI2 230 aaPredicted RBP16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 TMEM59LQ9UK28 342 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 PPM1HQ9ULR3 514 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 HS3ST2Q9Y278 367 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 BTBD3Q9Y2F9 522 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 DAAM1Q9Y4D1 1078 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 CFAP47Q6ZTR5 3102 aa16.6■□□□□ 0.25
CLSTN3-204ENST00000535313 E9PAM4 449 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 I6L893 689 aaPredicted RBP16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 PLK4O00444 970 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 PLRG1O43660 514 aaKnown RBP16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SNAP91O60641 907 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SRGAP2O75044 1071 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 RTN2O75298 545 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SRCP12931 536 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 OR1E1P30953 314 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SOX5P35711 763 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 NUDT1P36639 197 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 KLK7P49862 253 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 METAP1P53582 386 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 PPP2CBP62714 309 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 PPP2CAP67775 309 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 IL9RQ01113 521 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 CCDC15Q0P6D6 951 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 POM121L1PQ3SYA9 428 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SASS6Q6UVJ0 657 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 TFAP2DQ7Z6R9 452 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 FAM131BQ86XD5 332 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 DCAF4L2Q8NA75 395 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 PIP4K2CQ8TBX8 421 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SLC20A1Q8WUM9 679 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 PSMB7Q99436 277 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 ELF4Q99607 663 aaPredicted RBP16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 NLRC4Q9NPP4 1024 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 GDF3Q9NR23 364 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 METTL5Q9NRN9 209 aaKnown RBP16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 TMPRSS4Q9NRS4 437 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 FANCLQ9NW38 375 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 MPP6Q9NZW5 540 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 VPS51Q9UID3 782 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 SARDHQ9UL12 918 aa16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
CLSTN3-204ENST00000535313 IGLV3-10A0A075B6K4 115 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 A0A1B0GTQ1 180 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 GOLGA8CPA6NN73 597 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 C10orf142B7Z368 130 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 TNFSF14O43557 240 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 LATO43561 262 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 MT-CO1P00395 513 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 WNT1P04628 370 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 ATXN1LP0C7T5 689 aaKnown RBP16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 STAT1P42224 750 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 CLCN6P51797 869 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 ATP11AP98196 1134 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 TRNP1Q6NT89 227 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 ZNF783Q6ZMS7 281 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 TRIM72Q6ZMU5 477 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 GPT2Q8TD30 523 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 FAM131CQ96AQ9 280 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 PCMTD1Q96MG8 357 aaPredicted RBP16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 ANO10Q9NW15 660 aa16.58■□□□□ 0.24
CLSTN3-204ENST00000535313 SPEGQ15772 3267 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 PLXNA2O75051 1894 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 TMEM131Q92545 1883 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 A0A0D9SEW6 157 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 A0A1W2PR77 199 aa16.57■□□□□ 0.24
CLSTN3-204ENST00000535313 ILVBLA1L0T0 632 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms