RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 THEGQ9P2T0 379 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 ZNF212Q9UDV6 495 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 NUMBLQ9Y6R0 609 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
SCARB1-204ENST00000535005 KIF26AQ9ULI4 1882 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ESYT3A0FGR9 886 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CCT8L1PA6NM43 557 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 LOC730098B7Z3J9 87 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 DAPK3O43293 454 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TSPAN3O60637 253 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CLDN11O75508 207 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TJP3O95049 919 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CYBBP04839 570 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 KRT10P13645 584 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 IL9P15248 144 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CDH4P55283 916 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 RPS24P62847 133 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 KLF1Q13351 362 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 PAFAH1B3Q15102 231 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 RWDD4Q6NW29 188 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TMEM25Q86YD3 366 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 YAF2Q8IY57 180 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ASIC4Q96FT7 647 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TRMT61BQ9BVS5 477 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 PRKAG3Q9UGI9 489 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 EYSQ5T1H1 3165 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 A0A1B0GVM2 712 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TYW5A2RUC4 315 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TCAF2A6NFQ2 919 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ZSCAN5CA6NGD5 496 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CST8O60676 142 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 PPFIA2O75334 1257 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CNTN5O94779 1100 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 NFATC1O95644 943 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 PENKP01210 267 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 SGSHP51688 502 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 VCPP55072 806 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ADCY2Q08462 1091 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 BYSLQ13895 437 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 DHCR24Q15392 516 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ZKSCAN8Q15776 578 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ALFQ53S48 1182 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 LY6G5CQ5SRR4 150 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 TMC3Q7Z5M5 1100 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 RFX6Q8HWS3 928 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 LZTR1Q8N653 840 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 MAIP1Q8WWC4 291 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ATP2A3Q93084 1043 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 PGM2Q96G03 612 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 XPO6Q96QU8 1125 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 NAP1L3Q99457 506 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 HEMGNQ9BXL5 484 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 NSRP1Q9H0G5 558 aaKnown RBP12.6□□□□□ -0.39
SCARB1-204ENST00000535005 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 ETNK2Q9NVF9 386 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 HAUS2Q9NVX0 235 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 MPP6Q9NZW5 540 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 SLC12A4Q9UP95 1085 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
SCARB1-204ENST00000535005 C5orf42Q9H799 3197 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 ARNTLO00327 626 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 APOL1O14791 398 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-204ENST00000535005 TBL1XO60907 577 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 FGGP02679 453 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 NUDT17P0C025 328 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 SP100P23497 879 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-204ENST00000535005 CLNS1AP54105 237 aaKnown RBP12.59□□□□□ -0.39
SCARB1-204ENST00000535005 MRPS25P82663 173 aaKnown RBP12.59□□□□□ -0.39
SCARB1-204ENST00000535005 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 PLD5Q8N7P1 536 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 ST13P5Q8NFI4 369 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-204ENST00000535005 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-204ENST00000535005 DDI1Q8WTU0 396 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 PLCD4Q9BRC7 762 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 KLC2Q9H0B6 622 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 EBF2Q9HAK2 575 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 KCNK12Q9HB15 430 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 HPS4Q9NQG7 708 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 RAD54BQ9Y620 910 aa12.59□□□□□ -0.39
SCARB1-204ENST00000535005 LIN7AO14910 233 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 ADH1CP00326 375 aa12.58□□□□□ -0.4
SCARB1-204ENST00000535005 CYP17A1P05093 508 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms