RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 MARCOQ9UEW3 520 aaPredicted RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 RABL2BQ9UNT1 228 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 KIDINS220Q9ULH0 1771 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 TRIM3O75382 744 aaPredicted RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 LTA4HP09960 611 aaKnown RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 ITIH1P19827 911 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 RPS9P46781 194 aaKnown RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 MARCKSL1P49006 195 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 TPI1P60174 286 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 RAB14P61106 215 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 ECT2LQ008S8 904 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 SNAPC2Q13487 334 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 COL9A3Q14050 684 aaPredicted RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 DENND5AQ6IQ26 1287 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 NCCRP1Q6ZVX7 275 aaPredicted RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 GET4Q7L5D6 327 aaPredicted RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 TXNRD3Q86VQ6 643 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 NIM1KQ8IY84 436 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 STK40Q8N2I9 435 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 FAM47BQ8NA70 645 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 HDAC2Q92769 488 aaKnown RBP4.12□□□□□ -1.75
SOX6-217ENST00000533870 STRA6Q9BX79 667 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 ERVK-5Q9HDB9 667 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 PCDHGB4Q9UN71 923 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 TBC1D30Q9Y2I9 924 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 TRIM17Q9Y577 477 aa4.12□□□□□ -1.75
SOX6-217ENST00000533870 CAPN8A6NHC0 703 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 DCXO43602 365 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SUPT20HL2P0C7V6 817 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 KCNA2P16389 499 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ERCC2P18074 760 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MAPK8P45983 427 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 BCAP31P51572 246 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 GPSM2P81274 684 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MRPS9P82933 396 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 SLC25A3Q00325 362 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TRIM32Q13049 653 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FSCN1Q16658 493 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 RBM48Q5RL73 367 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 ARMC4Q5T2S8 1044 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 OR56A4Q8NGH8 313 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MMP27Q9H306 513 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 RIMKLBQ9ULI2 386 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CORO2BQ9UQ03 480 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 AURKCQ9UQB9 309 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FARP1Q9Y4F1 1045 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 SPATA31A5Q5VU36 1347 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SPATA31A7Q8IWB4 1347 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 RRN3P2A6NIE6 340 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 EEF2KO00418 725 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 STX11O75558 287 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MIPP30301 263 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CAPGP40121 348 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 STAT5AP42229 794 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ABL2P42684 1182 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 HIRAP54198 1017 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 SMIM11AP58511 58 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CNTN2Q02246 1040 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 BTG3Q14201 252 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 NR1D2Q14995 579 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 CRY1Q16526 586 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 DGKDQ16760 1214 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ATP6AP1LQ52LC2 224 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 THOC7Q6I9Y2 204 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 NEPROQ6NW34 567 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 DHRS4L2Q6PKH6 230 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SPATA19Q7Z5L4 167 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ADGRA1Q86SQ6 560 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ULK4Q96C45 1275 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 QKIQ96PU8 341 aaKnown RBP eCLIP4.11□□□□□ -1.75
SOX6-217ENST00000533870 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.11□□□□□ -1.75
SOX6-217ENST00000533870 MRPL39Q9NYK5 338 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 SEC14L4Q9UDX3 406 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SLC39A10Q9ULF5 831 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 USP18Q9UMW8 372 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 HEY1Q9Y5J3 304 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 IGLV3-22A0A075B6J6 115 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TAF4O00268 1085 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 GABRDO14764 452 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 UGT2B11O75310 529 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 WDR47O94967 919 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SEC24AO95486 1093 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 MLYCDO95822 493 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ERP29P30040 261 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 TKTL1P51854 596 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 PRKCEQ02156 737 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 C1DQ13901 141 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 NFYCQ13952 458 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 FASTKQ14296 549 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 SUZ12Q15022 739 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 LRRC36Q1X8D7 754 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ARSHQ5FYA8 562 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ARHGAP17Q68EM7 881 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 METTL2BQ6P1Q9 378 aaKnown RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 ANKRD23Q86SG2 305 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 ELMOD1Q8N336 334 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 NAT8LQ8N9F0 302 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 SYTL5Q8TDW5 730 aaPredicted RBP4.11□□□□□ -1.75
SOX6-217ENST00000533870 AZIN2Q96A70 460 aa4.11□□□□□ -1.75
SOX6-217ENST00000533870 TMEM176AQ96HP8 235 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms